FFCP PHASE1:Hg19::chr11:61124292..61124301,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220002 | |EntrezGene=220002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |HGNC=23014 | ||
|TSSclassifier=strong | |||
|UniProt=F5H832 | |UniProt=F5H832 | ||
|association_with_transcript=-19bp_to_ENST00000539890_5end | |association_with_transcript=-19bp_to_ENST00000539890_5end | ||
|cluster_id=chr11:61124292..61124301,- | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_18_at_CYBASC3_5end | |description=CAGE_peak_18_at_CYBASC3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!1.20e-44!14;CL:0000945!3.31e-35!24;CL:0000826!3.31e-35!24;CL:0000542!3.67e-22!53;CL:0000051!3.67e-22!53;CL:0000838!9.37e-20!52;CL:0000738!6.15e-18!140;CL:0000784!1.70e-17!3;CL:0000842!8.88e-16!3;CL:0002087!1.01e-14!119;CL:0000037!1.34e-13!172;CL:0000566!1.34e-13!172;CL:0000988!1.48e-12!182;CL:0000451!5.20e-12!10;CL:0000224!5.73e-12!4;CL:0002031!1.43e-08!124;CL:0002032!2.63e-08!165;CL:0000837!2.63e-08!165;CL:0000080!3.89e-08!6;CL:0000623!1.32e-07!3;CL:0000825!1.32e-07!3 | |ontology_enrichment_celltype=CL:0000236!1.20e-44!14;CL:0000945!3.31e-35!24;CL:0000826!3.31e-35!24;CL:0000542!3.67e-22!53;CL:0000051!3.67e-22!53;CL:0000838!9.37e-20!52;CL:0000738!6.15e-18!140;CL:0000784!1.70e-17!3;CL:0000842!8.88e-16!3;CL:0002087!1.01e-14!119;CL:0000037!1.34e-13!172;CL:0000566!1.34e-13!172;CL:0000988!1.48e-12!182;CL:0000451!5.20e-12!10;CL:0000224!5.73e-12!4;CL:0002031!1.43e-08!124;CL:0002032!2.63e-08!165;CL:0000837!2.63e-08!165;CL:0000080!3.89e-08!6;CL:0000623!1.32e-07!3;CL:0000825!1.32e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.75e-81;13!CL:0000945;1.25e-53;24!CL:0000784;2.57e-41;3!CL:0000542;1.29e-20;53!CL:0000451;9.19e-12;10 | |ontology_enrichment_celltype_v019=CL:0000236;6.75e-81;13!CL:0000945;1.25e-53;24!CL:0000784;2.57e-41;3!CL:0000542;1.29e-20;53!CL:0000451;9.19e-12;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.93e-75,14;CL:0000945,9.98e-54,24;CL:0000826,9.98e-54,24;CL:0000784,2.57e-41,3;CL:0000542,8.16e-29,53;CL:0000051,8.16e-29,53;CL:0000838,2.68e-24,52;CL:0000738,2.98e-20,136;CL:0002087,8.56e-18,115;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002031,2.17e-14,120;CL:0002032,2.53e-12,161;CL:0000837,2.53e-12,161;CL:0000451,9.19e-12,10;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.29e-20;53 | |ontology_enrichment_development_v019=CL:0000051;1.29e-20;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;2.25e-14;1 | |ontology_enrichment_disease_v019=DOID:12603;2.25e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,3.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.33e-18!7;UBERON:0002106!5.89e-16!3;UBERON:0004854!5.89e-16!3;UBERON:0009034!5.89e-16!3;UBERON:0002095!5.89e-16!3;UBERON:0004782!5.89e-16!3;UBERON:0003281!5.89e-16!3;UBERON:0009664!5.89e-16!3;UBERON:0002296!5.89e-16!3;UBERON:0005602!5.89e-16!3;UBERON:0001179!5.89e-16!3;UBERON:0006293!5.89e-16!3 | |ontology_enrichment_uberon=UBERON:0004177!9.33e-18!7;UBERON:0002106!5.89e-16!3;UBERON:0004854!5.89e-16!3;UBERON:0009034!5.89e-16!3;UBERON:0002095!5.89e-16!3;UBERON:0004782!5.89e-16!3;UBERON:0003281!5.89e-16!3;UBERON:0009664!5.89e-16!3;UBERON:0002296!5.89e-16!3;UBERON:0005602!5.89e-16!3;UBERON:0001179!5.89e-16!3;UBERON:0006293!5.89e-16!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p18@CYBASC3 | |short_description=p18@CYBASC3 | ||
}} | }} |
Latest revision as of 15:46, 18 September 2015
Short description: | p18@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CYBASC3_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -19bp_to_ENST00000539890_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | F5H832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.93e-75 | 14 |
lymphocyte of B lineage | 9.98e-54 | 24 |
pro-B cell | 9.98e-54 | 24 |
plasmacytoid dendritic cell | 2.57e-41 | 3 |
lymphocyte | 8.16e-29 | 53 |
common lymphoid progenitor | 8.16e-29 | 53 |
lymphoid lineage restricted progenitor cell | 2.68e-24 | 52 |
leukocyte | 2.98e-20 | 136 |
nongranular leukocyte | 8.56e-18 | 115 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 2.17e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-12 | 161 |
dendritic cell | 9.19e-12 | 10 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.15e-14 | 1 |