FFCP PHASE1:Hg19::chr7:5834097..5834103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:5834097..5834103,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr7:5834097..5834103,+ | |description=CAGE_peak_at_chr7:5834097..5834103,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!1.31e-11!3;CL:0000861!1.31e-11!3 | |ontology_enrichment_celltype=CL:0002150!1.31e-11!3;CL:0000861!1.31e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.01e-09;3 | |ontology_enrichment_celltype_v019=CL:0000322;1.01e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.01e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.28e-11;10!UBERON:0005564;6.28e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.28e-11;10!UBERON:0005564;6.28e-11;10 | ||
|ontology_enrichment_disease=DOID:162!3.59e-14!235;DOID:14566!1.09e-13!239;DOID:305!2.57e-12!106;DOID:0050687!1.03e-11!143;DOID:0050686!3.48e-08!137;DOID:1036!2.67e-07!8 | |ontology_enrichment_disease=DOID:162!3.59e-14!235;DOID:14566!1.09e-13!239;DOID:305!2.57e-12!106;DOID:0050687!1.03e-11!143;DOID:0050686!3.48e-08!137;DOID:1036!2.67e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:6193;8.64e-26;1!DOID:3910;6.43e-14;2!DOID:3350;1.29e-13;2 | |ontology_enrichment_disease_v019=DOID:6193;8.64e-26;1!DOID:3910;6.43e-14;2!DOID:3350;1.29e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,9.79e-26,1;DOID:3910,6.43e-14,2;DOID:3350,1.37e-13,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.43e-14;2!UBERON:0002173;6.43e-14;2!UBERON:0002186;6.43e-14;2!UBERON:0000473;2.07e-13;8!UBERON:0003135;5.06e-10;11!UBERON:0004821;1.01e-09;3!UBERON:0007499;1.01e-09;3!UBERON:0003215;1.01e-09;3!UBERON:0010368;1.01e-09;3!UBERON:0009911;1.01e-09;3!UBERON:0002299;1.01e-09;3!UBERON:0006524;1.01e-09;3!UBERON:0008874;1.01e-09;3!UBERON:0002169;1.01e-09;3!UBERON:0004894;1.01e-09;3!UBERON:0009856;1.31e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;6.43e-14;2!UBERON:0002173;6.43e-14;2!UBERON:0002186;6.43e-14;2!UBERON:0000473;2.07e-13;8!UBERON:0003135;5.06e-10;11!UBERON:0004821;1.01e-09;3!UBERON:0007499;1.01e-09;3!UBERON:0003215;1.01e-09;3!UBERON:0010368;1.01e-09;3!UBERON:0009911;1.01e-09;3!UBERON:0002299;1.01e-09;3!UBERON:0006524;1.01e-09;3!UBERON:0008874;1.01e-09;3!UBERON:0002169;1.01e-09;3!UBERON:0004894;1.01e-09;3!UBERON:0009856;1.31e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.43e-14,2;UBERON:0002173,6.43e-14,2;UBERON:0002186,6.43e-14,2;UBERON:0000473,2.07e-13,8;UBERON:0003135,5.06e-10,11;UBERON:0004821,1.01e-09,3;UBERON:0003215,1.01e-09,3;UBERON:0010368,1.01e-09,3;UBERON:0009911,1.01e-09,3;UBERON:0002299,1.01e-09,3;UBERON:0006524,1.01e-09,3;UBERON:0008874,1.01e-09,3;UBERON:0002169,1.01e-09,3;UBERON:0004894,1.01e-09,3 | |||
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| ||
|short_description=p@chr7:5834097..5834103,+ | |short_description=p@chr7:5834097..5834103,+ | ||
}} | }} |
Latest revision as of 10:58, 31 July 2015
Short description: | p@chr7:5834097..5834103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:5834097..5834103, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.43e-14 | 2 |
alveolar duct | 6.43e-14 | 2 |
bronchiole | 6.43e-14 | 2 |
testis | 2.07e-13 | 8 |
male reproductive organ | 5.06e-10 | 11 |
pulmonary alveolus epithelium | 1.01e-09 | 3 |
alveolus | 1.01e-09 | 3 |
pulmonary lobule | 1.01e-09 | 3 |
lobule | 1.01e-09 | 3 |
alveolus of lung | 1.01e-09 | 3 |
alveolar system | 1.01e-09 | 3 |
pulmonary acinus | 1.01e-09 | 3 |
alveolar sac | 1.01e-09 | 3 |
alveolar wall | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 9.79e-26 | 1 |
lung adenocarcinoma | 6.43e-14 | 2 |
mesenchymal cell neoplasm | 1.37e-13 | 2 |