FFCP PHASE1:Hg19::chr15:28000407..28000435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:28000407..28000435,+ | |||
|coexpression_cluster_id=C348 | |coexpression_cluster_id=C348 | ||
|description=CAGE_peak_at_chr15:28000407..28000435,+ | |description=CAGE_peak_at_chr15:28000407..28000435,+ | ||
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|ontology_enrichment_celltype=CL:0000148!2.31e-28!10;CL:0000541!2.31e-28!10;CL:0000147!2.88e-20!14;CL:0000075!1.07e-14!27;CL:0000710!3.55e-14!20;CL:0002566!7.03e-13!1;CL:0000325!4.65e-10!39;CL:0000333!4.25e-09!41;CL:0002077!1.51e-08!33 | |ontology_enrichment_celltype=CL:0000148!2.31e-28!10;CL:0000541!2.31e-28!10;CL:0000147!2.88e-20!14;CL:0000075!1.07e-14!27;CL:0000710!3.55e-14!20;CL:0002566!7.03e-13!1;CL:0000325!4.65e-10!39;CL:0000333!4.25e-09!41;CL:0002077!1.51e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.78e-79;10!CL:0000147;9.12e-57;14!CL:0002566;1.46e-50;1!CL:0000710;4.28e-40;20!CL:0000075;5.44e-30;27!CL:0002077;9.48e-22;34!CL:0000149;1.00e-13;4!CL:0000150;8.61e-07;9 | |ontology_enrichment_celltype_v019=CL:0000148;5.78e-79;10!CL:0000147;9.12e-57;14!CL:0002566;1.46e-50;1!CL:0000710;4.28e-40;20!CL:0000075;5.44e-30;27!CL:0002077;9.48e-22;34!CL:0000149;1.00e-13;4!CL:0000150;8.61e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.79e-79,10;CL:0000541,5.79e-79,10;CL:0000147,9.13e-57,14;CL:0002566,1.46e-50,1;CL:0000710,4.28e-40,20;CL:0000075,5.44e-30,27;CL:0002077,4.91e-24,34;CL:0000333,3.24e-19,41;CL:0000133,7.99e-14,59;CL:0000149,1.00e-13,4;CL:0000221,1.50e-11,72;CL:0000150,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000221;1.33e-07;72 | |ontology_enrichment_development_v019=CL:0000221;1.33e-07;72 | ||
|ontology_enrichment_disease=DOID:1909!5.73e-07!2 | |ontology_enrichment_disease=DOID:1909!5.73e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002581!4.81e-12!1;UBERON:0000966!1.26e-09!5;UBERON:0005388!1.26e-09!5;UBERON:0001802!1.26e-09!5;UBERON:0000970!5.66e-09!20;UBERON:0002104!1.48e-08!21;UBERON:0000020!7.93e-08!23;UBERON:0001032!1.65e-07!24;UBERON:0004456!1.65e-07!24 | |ontology_enrichment_uberon=UBERON:0002581!4.81e-12!1;UBERON:0000966!1.26e-09!5;UBERON:0005388!1.26e-09!5;UBERON:0001802!1.26e-09!5;UBERON:0000970!5.66e-09!20;UBERON:0002104!1.48e-08!21;UBERON:0000020!7.93e-08!23;UBERON:0001032!1.65e-07!24;UBERON:0004456!1.65e-07!24 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr15:28000407..28000435,+ | |short_description=p@chr15:28000407..28000435,+ | ||
}} | }} |
Latest revision as of 00:35, 25 July 2015
Short description: | p@chr15:28000407..28000435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:28000407..28000435, + |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.79e-79 | 10 |
melanoblast | 5.79e-79 | 10 |
pigment cell | 9.13e-57 | 14 |
dark melanocyte | 1.46e-50 | 1 |
neurecto-epithelial cell | 4.28e-40 | 20 |
columnar/cuboidal epithelial cell | 5.44e-30 | 27 |
ecto-epithelial cell | 4.91e-24 | 34 |
migratory neural crest cell | 3.24e-19 | 41 |
neurectodermal cell | 7.99e-14 | 59 |
visual pigment cell | 1.00e-13 | 4 |
ectodermal cell | 1.50e-11 | 72 |
glandular epithelial cell | 8.85e-07 | 9 |