FFCP PHASE1:Hg19::chr14:35874296..35874308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4792 | |EntrezGene=4792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7797 | |HGNC=7797 | ||
|TSSclassifier=strong | |||
|UniProt=P25963 | |UniProt=P25963 | ||
|association_with_transcript=-336bp_to_NM_020529,uc001wtf.3,uc001wtg.3,uc010amo.2_5end | |association_with_transcript=-336bp_to_NM_020529,uc001wtf.3,uc001wtg.3,uc010amo.2_5end | ||
|cluster_id=chr14:35874296..35874308,- | |||
|coexpression_cluster_id=C627 | |coexpression_cluster_id=C627 | ||
|description=CAGE_peak_12_at_NFKBIA_5end | |description=CAGE_peak_12_at_NFKBIA_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.01e-08!76;CL:0000094!1.52e-08!8;CL:0000738!5.23e-08!140;CL:0000860!3.79e-07!45;CL:0002057!6.75e-07!42;CL:0000081!9.27e-07!11 | |ontology_enrichment_celltype=CL:0000766!1.01e-08!76;CL:0000094!1.52e-08!8;CL:0000738!5.23e-08!140;CL:0000860!3.79e-07!45;CL:0002057!6.75e-07!42;CL:0000081!9.27e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.17e-18;5!CL:0000094;3.32e-17;8!CL:0000775;5.06e-17;3!CL:0000623;1.74e-16;3!CL:0000081;1.91e-12;11!CL:0000771;2.09e-12;2!CL:0000766;1.06e-10;69!CL:0000163;2.94e-10;9!CL:0002393;6.60e-09;6!CL:0002397;6.60e-09;6 | |ontology_enrichment_celltype_v019=CL:0000097;2.17e-18;5!CL:0000094;3.32e-17;8!CL:0000775;5.06e-17;3!CL:0000623;1.74e-16;3!CL:0000081;1.91e-12;11!CL:0000771;2.09e-12;2!CL:0000766;1.06e-10;69!CL:0000163;2.94e-10;9!CL:0002393;6.60e-09;6!CL:0002397;6.60e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.66e-23,136;CL:0000766,3.43e-20,72;CL:0000097,1.92e-18,5;CL:0002028,1.92e-18,5;CL:0000037,1.59e-17,168;CL:0000094,3.45e-17,8;CL:0000775,5.51e-17,3;CL:0000623,5.82e-17,3;CL:0000825,5.82e-17,3;CL:0002032,6.11e-17,161;CL:0000837,6.11e-17,161;CL:0000988,2.41e-16,177;CL:0002031,6.59e-15,120;CL:0000081,1.96e-12,11;CL:0000771,2.04e-12,2;CL:0000763,3.33e-12,108;CL:0000049,3.33e-12,108;CL:0000839,5.45e-11,66;CL:0002087,7.65e-11,115;CL:0000557,8.65e-11,67;CL:0000163,2.75e-10,9;CL:0000860,8.70e-09,42;CL:0002057,8.70e-09,42;CL:0000473,1.67e-07,48;CL:0000234,1.67e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-07;42 | |ontology_enrichment_development_v019=CL:0002057;4.95e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.11e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!4.11e-12!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-09,76;UBERON:0002390,4.82e-09,98;UBERON:0003061,4.82e-09,98;UBERON:0001474,2.30e-08,82;UBERON:0002405,2.52e-08,93;UBERON:0002193,6.23e-08,108;UBERON:0004765,2.10e-07,90 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,0,2.21598163412751,2.4065333696417,3.25516306073778,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,1.72372840368309,0.645484683583826,1.35426486594342,0,1.09162460023138,0,0.306083892370903,1.28371610830437,2.55734850319616,0,0,0,2.61188314765726,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,1.32171328579026,0.560508562981536,0,0.983548850569165,1.17903228824749,0.616804496998528,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,2.21767417547206,1.60464117470104,1.59306844271079,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,3.94130590316755,0.088048434013226,9.74442143041629,2.88239906833923,6.312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,1.97030760201927,1.94064817373566,2.43851768931522,0,0,0,0,0,4.49404214368309,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.796991953004279,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.384751292518985,0.113942055847001,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0.202203398942031,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0,0.31593289814244,0.300646838828985,0,0,0,0.627865836814451,1.19472429772959,0,0,0,0.0979923974143777,0,0.17472666824203,0.51595809741485,0,0.292357268344742,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0,0,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,1.43574604915363,0,0,0.669514372325618,0.470284307407084,0,0,0.945398187686684,1.483485450861,0.808842526250219,0.0984274815147488,0,0,0.681017030557878,0,0,0.415440338029185,0,0.77380195455795,0.0607495566580247,0,0.551639951094387,0.367182116944987,0.211200673038813,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0.293104467356165,0,0,0.26446520348538,0.171086837884329,0,0.427149650270779,0.314408610199332,0,0,0,0,0,0,0.7520696820681,0.612691153526923,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0.110929051536852,0.248385611765534,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0.169732529954025,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.478901577171454,0,0,0.276629009856872,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0.2957121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| ||
|short_description=p12@NFKBIA | |short_description=p12@NFKBIA | ||
}} | }} |
Latest revision as of 21:22, 19 September 2015
Short description: | p12@NFKBIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NFKBIA_5end |
Coexpression cluster: | C627_Mast_Eosinophils_CD14_Neutrophils_Basophils_immature_CD19 |
Association with transcript: | -336bp_to_NM_020529, uc001wtf.3, uc001wtg.3, uc010amo.2_5end |
EntrezGene: | NFKBIA |
HGNC: | 7797 |
UniProt: | P25963 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.66e-23 | 136 |
myeloid leukocyte | 3.43e-20 | 72 |
mast cell | 1.92e-18 | 5 |
basophil mast progenitor cell | 1.92e-18 | 5 |
hematopoietic stem cell | 1.59e-17 | 168 |
granulocyte | 3.45e-17 | 8 |
neutrophil | 5.51e-17 | 3 |
natural killer cell | 5.82e-17 | 3 |
pro-NK cell | 5.82e-17 | 3 |
hematopoietic oligopotent progenitor cell | 6.11e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.11e-17 | 161 |
hematopoietic cell | 2.41e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 6.59e-15 | 120 |
blood cell | 1.96e-12 | 11 |
eosinophil | 2.04e-12 | 2 |
myeloid cell | 3.33e-12 | 108 |
common myeloid progenitor | 3.33e-12 | 108 |
myeloid lineage restricted progenitor cell | 5.45e-11 | 66 |
nongranular leukocyte | 7.65e-11 | 115 |
granulocyte monocyte progenitor cell | 8.65e-11 | 67 |
endocrine cell | 2.75e-10 | 9 |
classical monocyte | 8.70e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.70e-09 | 42 |
defensive cell | 1.67e-07 | 48 |
phagocyte | 1.67e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-09 | 76 |
hematopoietic system | 4.82e-09 | 98 |
blood island | 4.82e-09 | 98 |
bone element | 2.30e-08 | 82 |
immune system | 2.52e-08 | 93 |
hemolymphoid system | 6.23e-08 | 108 |
skeletal element | 2.10e-07 | 90 |