FFCP PHASE1:Hg19::chr9:13432964..13432971,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:13432964..13432971,- | |||
|coexpression_cluster_id=C1506 | |coexpression_cluster_id=C1506 | ||
|description=CAGE_peak_at_chr9:13432964..13432971,- | |description=CAGE_peak_at_chr9:13432964..13432971,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002139!2.22e-65!24;CL:0000115!3.05e-44!35;CL:0005020!1.09e-40!6;CL:0002138!1.09e-40!6;CL:0005022!1.09e-40!6;CL:0002078!8.49e-35!44;CL:0000071!8.73e-33!18;CL:0002546!8.73e-33!18;CL:0002144!7.50e-30!3;CL:0000213!2.07e-26!57;CL:0000215!2.07e-26!57;CL:0000222!1.42e-11!119;CL:1000413!4.45e-10!9;CL:0000076!7.49e-09!62;CL:0002543!4.30e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.22e-65!24;CL:0000115!3.05e-44!35;CL:0005020!1.09e-40!6;CL:0002138!1.09e-40!6;CL:0005022!1.09e-40!6;CL:0002078!8.49e-35!44;CL:0000071!8.73e-33!18;CL:0002546!8.73e-33!18;CL:0002144!7.50e-30!3;CL:0000213!2.07e-26!57;CL:0000215!2.07e-26!57;CL:0000222!1.42e-11!119;CL:1000413!4.45e-10!9;CL:0000076!7.49e-09!62;CL:0002543!4.30e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.07e-135;6!CL:0002139;1.68e-49;24!CL:0000115;1.23e-23;36!CL:0002078;4.78e-23;45!CL:0000213;1.35e-16;58!CL:0000215;1.35e-16;58!CL:0002144;1.85e-12;3 | |ontology_enrichment_celltype_v019=CL:0002138;1.07e-135;6!CL:0002139;1.68e-49;24!CL:0000115;1.23e-23;36!CL:0002078;4.78e-23;45!CL:0000213;1.35e-16;58!CL:0000215;1.35e-16;58!CL:0002144;1.85e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.07e-135,6;CL:0002138,1.07e-135,6;CL:0005022,1.07e-135,6;CL:0002139,1.68e-49,24;CL:0000115,3.07e-33,36;CL:0002078,1.01e-26,45;CL:0000213,7.29e-21,58;CL:0000215,7.29e-21,58;CL:0002144,1.85e-12,3;CL:0000222,3.06e-10,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.07e-135;6 | |ontology_enrichment_development_v019=CL:0005022;1.07e-135;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.73e-33!18;UBERON:0004638!8.73e-33!18;UBERON:0004852!8.73e-33!18;UBERON:0001473!1.57e-30!8;UBERON:0004536!1.57e-30!8;UBERON:0006558!1.57e-30!8;UBERON:0001915!7.50e-30!3;UBERON:0001982!7.50e-30!3;UBERON:0000487!1.14e-26!22;UBERON:0002465!2.00e-24!10;UBERON:0006914!2.30e-23!25;UBERON:0000055!1.82e-21!69;UBERON:0002049!1.72e-18!79;UBERON:0007798!1.72e-18!79;UBERON:0004535!7.66e-15!110;UBERON:0001009!2.18e-14!113;UBERON:0003915!4.45e-10!9;UBERON:0004700!4.45e-10!9;UBERON:0001917!4.45e-10!9;UBERON:0004111!5.19e-10!241;UBERON:0001981!3.52e-09!60;UBERON:0007500!3.52e-09!60;UBERON:0004537!3.52e-09!60;UBERON:0006965!3.52e-09!60;UBERON:0000477!3.82e-09!286;UBERON:0004872!6.38e-08!84 | |ontology_enrichment_uberon=UBERON:0001986!8.73e-33!18;UBERON:0004638!8.73e-33!18;UBERON:0004852!8.73e-33!18;UBERON:0001473!1.57e-30!8;UBERON:0004536!1.57e-30!8;UBERON:0006558!1.57e-30!8;UBERON:0001915!7.50e-30!3;UBERON:0001982!7.50e-30!3;UBERON:0000487!1.14e-26!22;UBERON:0002465!2.00e-24!10;UBERON:0006914!2.30e-23!25;UBERON:0000055!1.82e-21!69;UBERON:0002049!1.72e-18!79;UBERON:0007798!1.72e-18!79;UBERON:0004535!7.66e-15!110;UBERON:0001009!2.18e-14!113;UBERON:0003915!4.45e-10!9;UBERON:0004700!4.45e-10!9;UBERON:0001917!4.45e-10!9;UBERON:0004111!5.19e-10!241;UBERON:0001981!3.52e-09!60;UBERON:0007500!3.52e-09!60;UBERON:0004537!3.52e-09!60;UBERON:0006965!3.52e-09!60;UBERON:0000477!3.82e-09!286;UBERON:0004872!6.38e-08!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.05e-102;8!UBERON:0004536;5.05e-102;8!UBERON:0006558;5.05e-102;8!UBERON:0002465;8.32e-82;10!UBERON:0002405;8.55e-31;27!UBERON:0002193;2.87e-17;42!UBERON:0000055;7.98e-13;65!UBERON:0010523;1.85e-12;3!UBERON:0001915;1.85e-12;3!UBERON:0001982;1.85e-12;3!UBERON:0002049;1.08e-10;75!UBERON:0007798;1.08e-10;75 | |ontology_enrichment_uberon_v019=UBERON:0001473;5.05e-102;8!UBERON:0004536;5.05e-102;8!UBERON:0006558;5.05e-102;8!UBERON:0002465;8.32e-82;10!UBERON:0002405;8.55e-31;27!UBERON:0002193;2.87e-17;42!UBERON:0000055;7.98e-13;65!UBERON:0010523;1.85e-12;3!UBERON:0001915;1.85e-12;3!UBERON:0001982;1.85e-12;3!UBERON:0002049;1.08e-10;75!UBERON:0007798;1.08e-10;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.05e-102,8;UBERON:0004536,5.05e-102,8;UBERON:0006558,5.05e-102,8;UBERON:0002465,8.32e-82,10;UBERON:0000055,7.10e-18,68;UBERON:0002049,1.20e-15,78;UBERON:0007798,1.20e-15,78;UBERON:0010523,1.85e-12,3;UBERON:0001915,1.85e-12,3;UBERON:0001982,1.85e-12,3;UBERON:0004535,2.52e-11,109;UBERON:0001009,4.95e-11,112;UBERON:0002405,3.25e-09,93;UBERON:0002193,5.35e-08,108 | |||
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|short_description=p@chr9:13432964..13432971,- | |short_description=p@chr9:13432964..13432971,- | ||
}} | }} |
Latest revision as of 23:41, 31 July 2015
Short description: | p@chr9:13432964..13432971, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:13432964..13432971, - |
Coexpression cluster: | C1506_Endothelial_Lymphatic_Hepatic_Renal_breast_heart_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.07e-135 | 6 |
endothelial cell of lymphatic vessel | 1.07e-135 | 6 |
vascular lymphangioblast | 1.07e-135 | 6 |
endothelial cell of vascular tree | 1.68e-49 | 24 |
endothelial cell | 3.07e-33 | 36 |
meso-epithelial cell | 1.01e-26 | 45 |
lining cell | 7.29e-21 | 58 |
barrier cell | 7.29e-21 | 58 |
capillary endothelial cell | 1.85e-12 | 3 |
mesodermal cell | 3.06e-10 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 5.05e-102 | 8 |
lymph vasculature | 5.05e-102 | 8 |
lymphatic part of lymphoid system | 5.05e-102 | 8 |
lymphoid system | 8.32e-82 | 10 |
vessel | 7.10e-18 | 68 |
vasculature | 1.20e-15 | 78 |
vascular system | 1.20e-15 | 78 |
microcirculatory vessel | 1.85e-12 | 3 |
endothelium of capillary | 1.85e-12 | 3 |
capillary | 1.85e-12 | 3 |
cardiovascular system | 2.52e-11 | 109 |
circulatory system | 4.95e-11 | 112 |
immune system | 3.25e-09 | 93 |
hemolymphoid system | 5.35e-08 | 108 |