FFCP PHASE1:Hg19::chr11:18422386..18422436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC011633_5end | |association_with_transcript=0bp_to_BC011633_5end | ||
|cluster_id=chr11:18422386..18422436,+ | |||
|coexpression_cluster_id=C1625 | |coexpression_cluster_id=C1625 | ||
|description=CAGE_peak_1_at_BC011633_5end | |description=CAGE_peak_1_at_BC011633_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.36e-13!180;CL:0000548!3.31e-09!679;CL:0000004!3.31e-09!679;CL:0000255!3.31e-09!679;CL:0000012!1.08e-08!682;CL:0000359!1.01e-07!32;CL:0000057!2.04e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.36e-13!180;CL:0000548!3.31e-09!679;CL:0000004!3.31e-09!679;CL:0000255!3.31e-09!679;CL:0000012!1.08e-08!682;CL:0000359!1.01e-07!32;CL:0000057!2.04e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.12e-08;32 | |ontology_enrichment_celltype_v019=CL:0000359;3.12e-08;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.17e-09,32;CL:0000057,1.23e-07,76;CL:0000680,2.14e-07,58;CL:0000056,2.14e-07,58;CL:0000355,2.14e-07,58;CL:0000393,4.21e-07,61;CL:0000211,4.21e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.07e-09!42;UBERON:0003509!5.07e-09!42;UBERON:0004572!5.07e-09!42;UBERON:0000914!3.79e-08!83;UBERON:0002329!3.79e-08!83;UBERON:0003077!3.79e-08!83;UBERON:0003059!3.79e-08!83;UBERON:0007282!3.79e-08!83;UBERON:0009618!3.79e-08!83;UBERON:0007285!3.79e-08!83;UBERON:0004290!8.55e-08!70;UBERON:0000486!3.79e-07!82;UBERON:0004573!6.76e-07!33;UBERON:0004571!6.76e-07!33;UBERON:0001737!8.02e-07!9 | |ontology_enrichment_uberon=UBERON:0001637!5.07e-09!42;UBERON:0003509!5.07e-09!42;UBERON:0004572!5.07e-09!42;UBERON:0000914!3.79e-08!83;UBERON:0002329!3.79e-08!83;UBERON:0003077!3.79e-08!83;UBERON:0003059!3.79e-08!83;UBERON:0007282!3.79e-08!83;UBERON:0009618!3.79e-08!83;UBERON:0007285!3.79e-08!83;UBERON:0004290!8.55e-08!70;UBERON:0000486!3.79e-07!82;UBERON:0004573!6.76e-07!33;UBERON:0004571!6.76e-07!33;UBERON:0001737!8.02e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.71e-08;9!UBERON:0001557;1.71e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.71e-08;9!UBERON:0001557;1.71e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.97e-09,42;UBERON:0003509,5.97e-09,42;UBERON:0004572,5.97e-09,42;UBERON:0007524,7.43e-09,73;UBERON:0002329,1.12e-08,71;UBERON:0003059,1.12e-08,71;UBERON:0007282,1.12e-08,71;UBERON:0004290,1.12e-08,71;UBERON:0009618,1.12e-08,71;UBERON:0001737,1.35e-08,9;UBERON:0003077,2.29e-08,72;UBERON:0007285,2.29e-08,72;UBERON:0001134,2.80e-07,62;UBERON:0002036,2.80e-07,62;UBERON:0003082,2.80e-07,62;UBERON:0000486,4.12e-07,83;UBERON:0004573,6.36e-07,33;UBERON:0004571,6.36e-07,33;UBERON:0007503,9.88e-07,78 | |||
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| ||
|short_description=p1@BC011633 | |short_description=p1@BC011633 | ||
}} | }} |
Latest revision as of 20:38, 23 July 2015
Short description: | p1@BC011633 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC011633_5end |
Coexpression cluster: | C1625_Olfactory_basal_Ewing_Adipocyte_mesenchymal_Smooth_serous |
Association with transcript: | 0bp_to_BC011633_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.17e-09 | 32 |
fibroblast | 1.23e-07 | 76 |
muscle precursor cell | 2.14e-07 | 58 |
myoblast | 2.14e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.14e-07 | 58 |
electrically responsive cell | 4.21e-07 | 61 |
electrically active cell | 4.21e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 5.97e-09 | 42 |
arterial blood vessel | 5.97e-09 | 42 |
arterial system | 5.97e-09 | 42 |
dense mesenchyme tissue | 7.43e-09 | 73 |
somite | 1.12e-08 | 71 |
presomitic mesoderm | 1.12e-08 | 71 |
presumptive segmental plate | 1.12e-08 | 71 |
dermomyotome | 1.12e-08 | 71 |
trunk paraxial mesoderm | 1.12e-08 | 71 |
larynx | 1.35e-08 | 9 |
paraxial mesoderm | 2.29e-08 | 72 |
presumptive paraxial mesoderm | 2.29e-08 | 72 |
skeletal muscle tissue | 2.80e-07 | 62 |
striated muscle tissue | 2.80e-07 | 62 |
myotome | 2.80e-07 | 62 |
multilaminar epithelium | 4.12e-07 | 83 |
systemic artery | 6.36e-07 | 33 |
systemic arterial system | 6.36e-07 | 33 |
epithelial vesicle | 9.88e-07 | 78 |