FFCP PHASE1:Hg19::chr17:48828395..48828410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51747 | |EntrezGene=51747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24309 | |HGNC=24309 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000503798_5end | |association_with_transcript=-1bp_to_ENST00000503798_5end | ||
|cluster_id=chr17:48828395..48828410,+ | |||
|description=CAGE_peak_3_at_LUC7L3_5end | |description=CAGE_peak_3_at_LUC7L3_5end | ||
|id=chr17:48828395..48828410,+ | |id=chr17:48828395..48828410,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!7.50e-09!235;DOID:14566!3.70e-08!239 | |ontology_enrichment_disease=DOID:162!7.50e-09!235;DOID:14566!3.70e-08!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!9.72e-09!41;UBERON:0001890!9.72e-09!41;UBERON:0006240!9.72e-09!41;UBERON:0001049!1.00e-08!57;UBERON:0005068!1.00e-08!57;UBERON:0006241!1.00e-08!57;UBERON:0007135!1.00e-08!57;UBERON:0003080!4.47e-08!42;UBERON:0002020!4.94e-08!34;UBERON:0003528!4.94e-08!34;UBERON:0002616!3.24e-07!59;UBERON:0002791!3.65e-07!33;UBERON:0001893!9.89e-07!34 | |ontology_enrichment_uberon=UBERON:0002780!9.72e-09!41;UBERON:0001890!9.72e-09!41;UBERON:0006240!9.72e-09!41;UBERON:0001049!1.00e-08!57;UBERON:0005068!1.00e-08!57;UBERON:0006241!1.00e-08!57;UBERON:0007135!1.00e-08!57;UBERON:0003080!4.47e-08!42;UBERON:0002020!4.94e-08!34;UBERON:0003528!4.94e-08!34;UBERON:0002616!3.24e-07!59;UBERON:0002791!3.65e-07!33;UBERON:0001893!9.89e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.27e-08;32!UBERON:0003528;5.05e-08;34!UBERON:0002020;5.05e-08;34!UBERON:0002780;9.08e-08;41!UBERON:0001890;9.08e-08;41!UBERON:0001869;2.02e-07;32!UBERON:0001893;7.40e-07;34!UBERON:0000956;7.77e-07;25!UBERON:0000203;7.77e-07;25!UBERON:0000073;9.38e-07;53!UBERON:0002616;9.38e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002791;2.27e-08;32!UBERON:0003528;5.05e-08;34!UBERON:0002020;5.05e-08;34!UBERON:0002780;9.08e-08;41!UBERON:0001890;9.08e-08;41!UBERON:0001869;2.02e-07;32!UBERON:0001893;7.40e-07;34!UBERON:0000956;7.77e-07;25!UBERON:0000203;7.77e-07;25!UBERON:0000073;9.38e-07;53!UBERON:0002616;9.38e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.62e-11,53;UBERON:0002616,5.62e-11,53;UBERON:0001049,1.14e-10,56;UBERON:0005068,1.14e-10,56;UBERON:0006241,1.14e-10,56;UBERON:0007135,1.14e-10,56;UBERON:0002780,1.97e-10,41;UBERON:0001890,1.97e-10,41;UBERON:0003080,1.97e-10,41;UBERON:0006240,1.97e-10,41;UBERON:0003528,7.95e-10,34;UBERON:0002020,7.95e-10,34;UBERON:0002346,2.64e-09,86;UBERON:0002791,3.75e-09,32;UBERON:0001016,1.73e-08,89;UBERON:0003075,1.82e-08,82;UBERON:0007284,1.82e-08,82;UBERON:0000955,3.19e-08,68;UBERON:0006238,3.19e-08,68;UBERON:0001893,3.91e-08,34;UBERON:0001869,5.59e-08,32;UBERON:0001017,2.31e-07,81;UBERON:0003056,4.00e-07,61;UBERON:0000956,9.07e-07,25;UBERON:0000203,9.07e-07,25 | |||
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| ||
|short_description=p3@LUC7L3 | |short_description=p3@LUC7L3 | ||
}} | }} |
Latest revision as of 04:10, 16 September 2015
Short description: | p3@LUC7L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LUC7L3_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000503798_5end |
EntrezGene: | LUC7L3 |
HGNC: | 24309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.62e-11 | 53 |
regional part of brain | 5.62e-11 | 53 |
neural tube | 1.14e-10 | 56 |
neural rod | 1.14e-10 | 56 |
future spinal cord | 1.14e-10 | 56 |
neural keel | 1.14e-10 | 56 |
regional part of forebrain | 1.97e-10 | 41 |
forebrain | 1.97e-10 | 41 |
anterior neural tube | 1.97e-10 | 41 |
future forebrain | 1.97e-10 | 41 |
brain grey matter | 7.95e-10 | 34 |
gray matter | 7.95e-10 | 34 |
neurectoderm | 2.64e-09 | 86 |
regional part of telencephalon | 3.75e-09 | 32 |
nervous system | 1.73e-08 | 89 |
neural plate | 1.82e-08 | 82 |
presumptive neural plate | 1.82e-08 | 82 |
brain | 3.19e-08 | 68 |
future brain | 3.19e-08 | 68 |
telencephalon | 3.91e-08 | 34 |
cerebral hemisphere | 5.59e-08 | 32 |
central nervous system | 2.31e-07 | 81 |
pre-chordal neural plate | 4.00e-07 | 61 |
cerebral cortex | 9.07e-07 | 25 |
pallium | 9.07e-07 | 25 |