FFCP PHASE1:Hg19::chr3:52828805..52828821,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3699 | |EntrezGene=3699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6168 | |HGNC=6168 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET33,Q06033 | |UniProt=E7ET33,Q06033 | ||
|association_with_transcript=0bp_to_ENST00000416872,ENST00000449956_5end | |association_with_transcript=0bp_to_ENST00000416872,ENST00000449956_5end | ||
|cluster_id=chr3:52828805..52828821,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_ITIH3_5end | |description=CAGE_peak_1_at_ITIH3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.77e-11;12 | |ontology_enrichment_celltype_v019=CL:0000182;3.77e-11;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.79e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.22e-12;7!UBERON:0004161;4.83e-12;11!UBERON:0009497;4.52e-10;13!UBERON:0006965;5.66e-08;2!UBERON:0006603;9.26e-08;65!UBERON:0003104;1.44e-07;31 | |ontology_enrichment_development_v019=UBERON:0004872;1.22e-12;7!UBERON:0004161;4.83e-12;11!UBERON:0009497;4.52e-10;13!UBERON:0006965;5.66e-08;2!UBERON:0006603;9.26e-08;65!UBERON:0003104;1.44e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-62!115;UBERON:0001049!3.72e-13!57;UBERON:0005068!3.72e-13!57;UBERON:0006241!3.72e-13!57;UBERON:0007135!3.72e-13!57;UBERON:0005057!4.57e-11!26;UBERON:0001017!5.81e-11!82;UBERON:0005743!6.40e-11!86;UBERON:0003075!2.86e-10!86;UBERON:0007284!2.86e-10!86;UBERON:0000477!2.86e-10!286;UBERON:0004111!5.58e-10!241;UBERON:0002346!1.97e-09!90;UBERON:0002616!2.23e-09!59;UBERON:0002368!4.13e-09!35;UBERON:0000073!4.57e-09!94;UBERON:0001016!4.57e-09!94;UBERON:0000025!5.69e-09!194;UBERON:0002107!6.90e-09!19;UBERON:0006925!6.90e-09!19;UBERON:0008836!6.90e-09!19;UBERON:0000062!1.04e-08!511;UBERON:0000955!1.35e-08!69;UBERON:0006238!1.35e-08!69;UBERON:0003080!1.55e-08!42;UBERON:0002298!2.77e-08!8;UBERON:0009854!2.87e-08!23;UBERON:0000481!3.81e-08!347;UBERON:0002780!8.39e-08!41;UBERON:0001890!8.39e-08!41;UBERON:0006240!8.39e-08!41;UBERON:0009497!2.08e-07!25;UBERON:0000015!2.08e-07!25;UBERON:0002423!2.08e-07!25;UBERON:0006235!2.08e-07!25;UBERON:0004161!2.08e-07!25;UBERON:0008835!2.75e-07!22;UBERON:0003894!2.75e-07!22;UBERON:0002530!4.10e-07!59;UBERON:0001893!5.32e-07!34;UBERON:0009856!5.92e-07!26;UBERON:0002020!6.02e-07!34;UBERON:0003528!6.02e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!1.28e-62!115;UBERON:0001049!3.72e-13!57;UBERON:0005068!3.72e-13!57;UBERON:0006241!3.72e-13!57;UBERON:0007135!3.72e-13!57;UBERON:0005057!4.57e-11!26;UBERON:0001017!5.81e-11!82;UBERON:0005743!6.40e-11!86;UBERON:0003075!2.86e-10!86;UBERON:0007284!2.86e-10!86;UBERON:0000477!2.86e-10!286;UBERON:0004111!5.58e-10!241;UBERON:0002346!1.97e-09!90;UBERON:0002616!2.23e-09!59;UBERON:0002368!4.13e-09!35;UBERON:0000073!4.57e-09!94;UBERON:0001016!4.57e-09!94;UBERON:0000025!5.69e-09!194;UBERON:0002107!6.90e-09!19;UBERON:0006925!6.90e-09!19;UBERON:0008836!6.90e-09!19;UBERON:0000062!1.04e-08!511;UBERON:0000955!1.35e-08!69;UBERON:0006238!1.35e-08!69;UBERON:0003080!1.55e-08!42;UBERON:0002298!2.77e-08!8;UBERON:0009854!2.87e-08!23;UBERON:0000481!3.81e-08!347;UBERON:0002780!8.39e-08!41;UBERON:0001890!8.39e-08!41;UBERON:0006240!8.39e-08!41;UBERON:0009497!2.08e-07!25;UBERON:0000015!2.08e-07!25;UBERON:0002423!2.08e-07!25;UBERON:0006235!2.08e-07!25;UBERON:0004161!2.08e-07!25;UBERON:0008835!2.75e-07!22;UBERON:0003894!2.75e-07!22;UBERON:0002530!4.10e-07!59;UBERON:0001893!5.32e-07!34;UBERON:0009856!5.92e-07!26;UBERON:0002020!6.02e-07!34;UBERON:0003528!6.02e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.44e-12;19!UBERON:0006925;7.44e-12;19!UBERON:0002423;6.94e-11;25!UBERON:0002365;3.99e-08;31!UBERON:0002330;3.99e-08;31!UBERON:0002360;4.82e-08;2!UBERON:0000094;4.82e-08;2!UBERON:0010743;4.82e-08;2!UBERON:0002368;6.19e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0002107;7.44e-12;19!UBERON:0006925;7.44e-12;19!UBERON:0002423;6.94e-11;25!UBERON:0002365;3.99e-08;31!UBERON:0002330;3.99e-08;31!UBERON:0002360;4.82e-08;2!UBERON:0000094;4.82e-08;2!UBERON:0010743;4.82e-08;2!UBERON:0002368;6.19e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.71e-31,114;UBERON:0009854,7.14e-12,23;UBERON:0002107,7.47e-12,19;UBERON:0006925,7.47e-12,19;UBERON:0008836,7.47e-12,19;UBERON:0009497,7.05e-11,25;UBERON:0000015,7.05e-11,25;UBERON:0002423,7.05e-11,25;UBERON:0006235,7.05e-11,25;UBERON:0004161,7.05e-11,25;UBERON:0009856,2.70e-10,26;UBERON:0008835,4.94e-10,22;UBERON:0003894,4.94e-10,22;UBERON:0007499,1.19e-08,25;UBERON:0002365,2.41e-08,31;UBERON:0002330,2.41e-08,31;UBERON:0002360,3.33e-08,2;UBERON:0000094,3.33e-08,2;UBERON:0010743,3.33e-08,2;UBERON:0004921,3.97e-08,118;UBERON:0005172,1.53e-07,54;UBERON:0005173,1.53e-07,54;UBERON:0001007,2.60e-07,145;UBERON:0001555,2.60e-07,145;UBERON:0007026,2.60e-07,145;UBERON:0002368,3.30e-07,35;UBERON:0004119,6.67e-07,160;UBERON:0000925,6.67e-07,160;UBERON:0006595,6.67e-07,160 | |||
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| ||
|short_description=p1@ITIH3 | |short_description=p1@ITIH3 | ||
}} | }} |
Latest revision as of 01:00, 19 September 2015
Short description: | p1@ITIH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITIH3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000416872, ENST00000449956_5end |
EntrezGene: | ITIH3 |
HGNC: | 6168 |
UniProt: | E7ET33Q06033 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.79e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.71e-31 | 114 |
digestive tract diverticulum | 7.14e-12 | 23 |
liver | 7.47e-12 | 19 |
digestive gland | 7.47e-12 | 19 |
liver bud | 7.47e-12 | 19 |
epithelium of foregut-midgut junction | 7.05e-11 | 25 |
anatomical boundary | 7.05e-11 | 25 |
hepatobiliary system | 7.05e-11 | 25 |
foregut-midgut junction | 7.05e-11 | 25 |
septum transversum | 7.05e-11 | 25 |
sac | 2.70e-10 | 26 |
hepatic diverticulum | 4.94e-10 | 22 |
liver primordium | 4.94e-10 | 22 |
epithelial sac | 1.19e-08 | 25 |
exocrine gland | 2.41e-08 | 31 |
exocrine system | 2.41e-08 | 31 |
meninx | 3.33e-08 | 2 |
membrane organ | 3.33e-08 | 2 |
meningeal cluster | 3.33e-08 | 2 |
subdivision of digestive tract | 3.97e-08 | 118 |
abdomen element | 1.53e-07 | 54 |
abdominal segment element | 1.53e-07 | 54 |
digestive system | 2.60e-07 | 145 |
digestive tract | 2.60e-07 | 145 |
primitive gut | 2.60e-07 | 145 |
endocrine gland | 3.30e-07 | 35 |
endoderm-derived structure | 6.67e-07 | 160 |
endoderm | 6.67e-07 | 160 |
presumptive endoderm | 6.67e-07 | 160 |