FFCP PHASE1:Hg19::chr2:54785587..54785598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6711 | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |HGNC=11275 | ||
|TSSclassifier=strong | |||
|UniProt=Q01082 | |UniProt=Q01082 | ||
|association_with_transcript=56bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | |association_with_transcript=56bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | ||
|cluster_id=chr2:54785587..54785598,+ | |||
|description=CAGE_peak_11_at_SPTBN1_5end | |description=CAGE_peak_11_at_SPTBN1_5end | ||
|id=chr2:54785587..54785598,+ | |id=chr2:54785587..54785598,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.70e-23!254;CL:0000063!6.84e-09!578;CL:0000542!1.89e-07!53;CL:0000051!1.89e-07!53;CL:0000223!2.18e-07!59;CL:0000838!2.26e-07!52;CL:0000076!3.71e-07!62;CL:0002076!8.08e-07!43 | |ontology_enrichment_celltype=CL:0000066!9.70e-23!254;CL:0000063!6.84e-09!578;CL:0000542!1.89e-07!53;CL:0000051!1.89e-07!53;CL:0000223!2.18e-07!59;CL:0000838!2.26e-07!52;CL:0000076!3.71e-07!62;CL:0002076!8.08e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.84e-07;42 | |ontology_enrichment_celltype_v019=CL:0002076;2.84e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.22e-21,253;CL:0000223,8.29e-10,58;CL:0002076,2.01e-08,42;CL:0000542,6.41e-07,53;CL:0000051,6.41e-07,53;CL:0000838,8.03e-07,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!9.94e-10!106;DOID:0050687!7.98e-07!143 | |ontology_enrichment_disease=DOID:305!9.94e-10!106;DOID:0050687!7.98e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.02e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.83e-11!169;UBERON:0000925!1.83e-11!169;UBERON:0006595!1.83e-11!169;UBERON:0001007!8.43e-09!155;UBERON:0001555!8.43e-09!155;UBERON:0007026!8.43e-09!155;UBERON:0004921!8.16e-08!129;UBERON:0004185!8.16e-08!129;UBERON:0000077!1.44e-07!130 | |ontology_enrichment_uberon=UBERON:0004119!1.83e-11!169;UBERON:0000925!1.83e-11!169;UBERON:0006595!1.83e-11!169;UBERON:0001007!8.43e-09!155;UBERON:0001555!8.43e-09!155;UBERON:0007026!8.43e-09!155;UBERON:0004921!8.16e-08!129;UBERON:0004185!8.16e-08!129;UBERON:0000077!1.44e-07!130 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.27e-09,160;UBERON:0000925,1.27e-09,160;UBERON:0006595,1.27e-09,160;UBERON:0004921,2.52e-07,118;UBERON:0003929,3.25e-07,54;UBERON:0001007,4.17e-07,145;UBERON:0001555,4.17e-07,145;UBERON:0007026,4.17e-07,145 | |||
|phase1_expression=0.181678379270557,0.856402095563933,1.40954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,3.27662058195258,4.22027165165526,0.618831764800233,0.994192127183747,0,1.80808358407193,0.730310090387373,0,0.123121058076788,0.612002073732759,0.313454721478088,0,1.36874425072884,1.12988375635323,2.06316195519468,3.11982239909794,1.96776953284198,0.786728553697808,5.37361157336098,0.77408061658038,0,0.90361775633475,1.47901604066715,0,0.710846162437108,0.587200878669695,0,1.40381113229099,1.08505435357926,0,0.647787332037959,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,2.29900975981793,1.98313461835459,2.86216126360609,3.41527781465669,2.34894875748376,2.6759125968766,0,0.560508562981536,0.526768169550154,3.73748563216283,11.0043013569766,5.96244347098577,1.83905144929746,2.93330039970231,0.473447805734733,0,1.55974639639243,0.589211814949674,0.664601683750863,1.35401931882508,2.5618263945135,2.08094956095805,2.95988228286617,1.38175008892924,1.15921234294021,6.22803565280654,4.28065324943541,5.22677619024884,1.81294948316106,3.06576394881537,0.68725489096526,5.31341353240956,3.50421955756506,1.95325036156926,0.950452044448374,0.451725357233318,0.639933055772092,1.24930726552346,3.07810427657222,0.821127996921047,1.81446068902259,8.02320587350522,4.63438092424957,0,1.34140171940727,1.15076305659177,0.722878304769133,0.50133791063589,0.434539556882471,0,1.45990461090791,1.60709189178915,2.21729397462564,2.98638271356629,1.44076983047484,0,1.85392221392215,0,0,0,0.476981248610684,0.571994910780128,0,0.993812036833525,1.72046919021225,1.38856200643038,0,0.419499436209906,0.550236083880135,2.08994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0,0.760272105718513,0.976248230192678,0.367663080345869,3.24056779152704,1.07159673940896,1.57170560838319,0.675668882899933,1.53316637465883,1.89853131913626,0.732806975721629,1.31780417436063,0,0.436094052142534,0.496971951695318,2.65924074495618,0.397227542439656,1.14734648299525,2.83734705758686,0.560677600142307,1.06748995729705,1.97334038733728,0.622422070799533,1.0776853765575,0.980771418680752,0.151357427644931,1.72852777344,0.468642863667593,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,1.22492502752936,2.21101771161182,0.619954687054593,0,0.247266929278557,0,0,0.505008341862199,1.37630371859161,1.38532057742091,0.438977620880838,0.919463387397059,0.600952235626387,2.38207584636044,2.51145489964407,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,1.03056216018252,0.744467425326359,1.85653965465393,0.389748020644795,0.504867548488229,0.276149695926898,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.57978255948989,3.00020732649918,2.29443676311203,1.46368447355514,0.397589304964456,0.348581828608555,0.621966330092223,2.01856680700503,0.72995471815166,0,0,2.76269842704961,0,0,2.01121560067735,2.36018566109342,2.41011029883482,1.32352767278873,1.52515610864684,1.42362371466658,0.943819157121151,0.392442930250692,0.38474715694639,0,0,1.2347220339942,1.47008711385542,3.80265104465493,3.9313088667105,3.54473944008842,1.7658523976586,3.56666471775029,1.20097467208968,5.5972645558399,0,1.91005047582099,2.40729957412177,0.325808305310325,0,1.44331342025273,0.34779121492523,2.46558257895225,0.144366447761074,0,0.380508304469197,3.1608175918371,0,0,0,0.297262324577456,0.93733833986777,1.17587489739202,2.1266264586358,1.34337784054272,2.61570544662566,1.53353071666084,2.95597942737566,0.616339038092582,0.829312462163088,0.576479813667846,0.6312121671319,0.444485260045183,0.763976851116555,2.34434894420094,0,1.13110241973656,3.90445975197093,2.5724378936752,0.112131084345361,0,2.7868548611961,2.45616259939778,0,0.845302752556,0.26593811658487,2.08014873822732,0,0,1.5985330740966,1.42977993658148,0,0,0,0.710783897485092,0.791951872933429,3.61727252471503,2.61460037580088,8.59767724165691,0,1.00451418286425,0,1.67737398844108,0,0,0.868687840005475,0.205476322550383,0.537182889719687,1.68127715990291,1.18218456121156,5.82194452120697,2.82354679815446,1.77866236955724,0,0,0.167516265334349,0,0,0,0,0.981531933753119,1.50051156317903,0,1.66376689224646,3.56857977594324,1.73472656537328,1.87426263988341,2.10662269809403,0,1.03473071292505,0.664225598535437,0.737476674166813,0.347534457872331,0,0,3.10152039184331,3.45142721309787,3.20182673410333,3.63753085735511,1.66435439510497,3.62868351995616,0.992431231275107,1.07423381301644,0.280660094433074,1.79394808957981,0.511707249066704,0.482561763430822,0,1.3878872442239,0,0.739144404124282,3.63478100428535,0.116210378459959,1.45031339509947,4.21063587636898,2.67034867914099,1.95184561879831,4.73437036817464,0.393373244878272,1.353598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| ||
|short_description=p11@SPTBN1 | |short_description=p11@SPTBN1 | ||
}} | }} |
Latest revision as of 15:47, 17 September 2015
Short description: | p11@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000333896, NM_178313, uc002rxx.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.22e-21 | 253 |
endodermal cell | 8.29e-10 | 58 |
endo-epithelial cell | 2.01e-08 | 42 |
lymphocyte | 6.41e-07 | 53 |
common lymphoid progenitor | 6.41e-07 | 53 |
lymphoid lineage restricted progenitor cell | 8.03e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.27e-09 | 160 |
endoderm | 1.27e-09 | 160 |
presumptive endoderm | 1.27e-09 | 160 |
subdivision of digestive tract | 2.52e-07 | 118 |
gut epithelium | 3.25e-07 | 54 |
digestive system | 4.17e-07 | 145 |
digestive tract | 4.17e-07 | 145 |
primitive gut | 4.17e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.02e-09 | 106 |