FFCP PHASE1:Hg19::chr10:43633962..43633969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55454 | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24292 | |HGNC=24292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6G5 | |UniProt=Q8N6G5 | ||
|association_with_transcript=28bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |association_with_transcript=28bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | ||
|cluster_id=chr10:43633962..43633969,+ | |||
|coexpression_cluster_id=C3017 | |coexpression_cluster_id=C3017 | ||
|description=CAGE_peak_5_at_CSGALNACT2_5end | |description=CAGE_peak_5_at_CSGALNACT2_5end | ||
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|ontology_enrichment_celltype=CL:0000766!2.54e-32!76;CL:0000839!8.41e-30!70;CL:0000738!1.99e-29!140;CL:0000557!4.08e-29!71;CL:0002057!7.99e-29!42;CL:0002009!1.25e-28!65;CL:0002194!1.35e-27!63;CL:0000576!1.35e-27!63;CL:0000040!1.35e-27!63;CL:0000559!1.35e-27!63;CL:0000860!1.41e-26!45;CL:0002031!3.66e-26!124;CL:0002087!2.59e-24!119;CL:0000037!7.48e-20!172;CL:0000566!7.48e-20!172;CL:0000988!5.22e-19!182;CL:0002032!1.78e-17!165;CL:0000837!1.78e-17!165;CL:0000763!3.45e-17!112;CL:0000049!3.45e-17!112;CL:0002320!4.06e-14!365;CL:0000134!5.87e-14!358;CL:0000048!1.80e-13!430;CL:0000723!2.53e-13!436;CL:0000034!8.93e-13!444;CL:0000219!2.85e-11!390;CL:0002393!3.18e-07!9;CL:0002397!3.18e-07!9 | |ontology_enrichment_celltype=CL:0000766!2.54e-32!76;CL:0000839!8.41e-30!70;CL:0000738!1.99e-29!140;CL:0000557!4.08e-29!71;CL:0002057!7.99e-29!42;CL:0002009!1.25e-28!65;CL:0002194!1.35e-27!63;CL:0000576!1.35e-27!63;CL:0000040!1.35e-27!63;CL:0000559!1.35e-27!63;CL:0000860!1.41e-26!45;CL:0002031!3.66e-26!124;CL:0002087!2.59e-24!119;CL:0000037!7.48e-20!172;CL:0000566!7.48e-20!172;CL:0000988!5.22e-19!182;CL:0002032!1.78e-17!165;CL:0000837!1.78e-17!165;CL:0000763!3.45e-17!112;CL:0000049!3.45e-17!112;CL:0002320!4.06e-14!365;CL:0000134!5.87e-14!358;CL:0000048!1.80e-13!430;CL:0000723!2.53e-13!436;CL:0000034!8.93e-13!444;CL:0000219!2.85e-11!390;CL:0002393!3.18e-07!9;CL:0002397!3.18e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.30e-50;33!CL:0002057;3.30e-50;33!CL:0000473;1.25e-43;39!CL:0000234;1.25e-43;39!CL:0000576;1.36e-40;48!CL:0000766;5.34e-33;69!CL:0002087;1.30e-15;104!CL:0000738;2.73e-14;136!CL:0000763;2.67e-13;100!CL:0002393;1.22e-10;6!CL:0002397;1.22e-10;6!CL:0000094;7.16e-10;8!CL:0000988;4.03e-09;177!CL:0000081;9.64e-09;11!CL:0000219;3.45e-07;193!CL:0000840;4.13e-07;5!CL:0000451;6.23e-07;10!CL:0000875;9.03e-07;3!CL:0002396;9.03e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;3.30e-50;33!CL:0002057;3.30e-50;33!CL:0000473;1.25e-43;39!CL:0000234;1.25e-43;39!CL:0000576;1.36e-40;48!CL:0000766;5.34e-33;69!CL:0002087;1.30e-15;104!CL:0000738;2.73e-14;136!CL:0000763;2.67e-13;100!CL:0002393;1.22e-10;6!CL:0002397;1.22e-10;6!CL:0000094;7.16e-10;8!CL:0000988;4.03e-09;177!CL:0000081;9.64e-09;11!CL:0000219;3.45e-07;193!CL:0000840;4.13e-07;5!CL:0000451;6.23e-07;10!CL:0000875;9.03e-07;3!CL:0002396;9.03e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.10e-79,72;CL:0000473,5.23e-72,48;CL:0000234,5.23e-72,48;CL:0000557,4.85e-71,67;CL:0002009,5.25e-71,61;CL:0000860,1.70e-70,42;CL:0002057,1.70e-70,42;CL:0000839,1.50e-69,66;CL:0002194,2.23e-68,59;CL:0000576,2.23e-68,59;CL:0000040,2.23e-68,59;CL:0000559,2.23e-68,59;CL:0000738,4.18e-66,136;CL:0002031,1.86e-54,120;CL:0002087,1.63e-52,115;CL:0000763,1.11e-51,108;CL:0000049,1.11e-51,108;CL:0000037,2.08e-50,168;CL:0000988,5.47e-48,177;CL:0002032,1.55e-45,161;CL:0000837,1.55e-45,161;CL:0000134,3.05e-21,354;CL:0002320,2.43e-20,361;CL:0000219,3.50e-17,386;CL:0000048,3.98e-17,427;CL:0000723,1.58e-16,433;CL:0000034,1.87e-16,441;CL:0002393,8.47e-16,9;CL:0002397,8.47e-16,9;CL:0000094,4.46e-10,8;CL:0000081,8.18e-09,11;CL:0000840,5.03e-07,5;CL:0001029,5.03e-07,5;CL:0000451,6.87e-07,10;CL:0000875,8.26e-07,3;CL:0002396,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-50;42!CL:0000049;1.73e-14;108 | |ontology_enrichment_development_v019=CL:0002057;4.50e-50;42!CL:0000049;1.73e-14;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.37e-33!102;UBERON:0003061!2.37e-33!102;UBERON:0002193!2.68e-29!112;UBERON:0001474!1.08e-28!86;UBERON:0002371!1.93e-28!80;UBERON:0004765!2.78e-24!101;UBERON:0001434!2.78e-24!101;UBERON:0002405!1.34e-17!115;UBERON:0002204!5.48e-17!167;UBERON:0002384!5.26e-13!375;UBERON:0003081!1.08e-11!216 | |ontology_enrichment_uberon=UBERON:0002390!2.37e-33!102;UBERON:0003061!2.37e-33!102;UBERON:0002193!2.68e-29!112;UBERON:0001474!1.08e-28!86;UBERON:0002371!1.93e-28!80;UBERON:0004765!2.78e-24!101;UBERON:0001434!2.78e-24!101;UBERON:0002405!1.34e-17!115;UBERON:0002204!5.48e-17!167;UBERON:0002384!5.26e-13!375;UBERON:0003081!1.08e-11!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p5@CSGALNACT2 | |short_description=p5@CSGALNACT2 | ||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p5@CSGALNACT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSGALNACT2_5end |
Coexpression cluster: | C3017_CD14_CD14CD16_Eosinophils_Mast_Neutrophils_Basophils_CD34 |
Association with transcript: | 28bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
EntrezGene: | CSGALNACT2 |
HGNC: | 24292 |
UniProt: | Q8N6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.71e-65 | 76 |
bone element | 1.56e-63 | 82 |
hematopoietic system | 4.56e-63 | 98 |
blood island | 4.56e-63 | 98 |
skeletal element | 3.12e-56 | 90 |
hemolymphoid system | 2.34e-55 | 108 |
immune system | 4.77e-50 | 93 |
skeletal system | 9.49e-49 | 100 |
musculoskeletal system | 2.70e-28 | 167 |
lateral plate mesoderm | 6.64e-26 | 203 |
connective tissue | 6.75e-20 | 371 |
mesoderm | 5.52e-12 | 315 |
mesoderm-derived structure | 5.52e-12 | 315 |
presumptive mesoderm | 5.52e-12 | 315 |