FFCP PHASE1:Hg19::chr6:56483677..56483688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=667 | |EntrezGene=667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q03001 | |UniProt=Q03001 | ||
|association_with_transcript=-9bp_to_M22942_5end | |association_with_transcript=-9bp_to_M22942_5end | ||
|cluster_id=chr6:56483677..56483688,- | |||
|description=CAGE_peak_138_at_DST_5end | |description=CAGE_peak_138_at_DST_5end | ||
|id=chr6:56483677..56483688,- | |id=chr6:56483677..56483688,- | ||
|ontology_enrichment_celltype=CL:0002076!2.26e-12!43;CL:0000223!1.32e-09!59;CL:0002251!4.69e-08!21;CL:0000066!1.18e-07!254 | |ontology_enrichment_celltype=CL:0002076!2.26e-12!43;CL:0000223!1.32e-09!59;CL:0002251!4.69e-08!21;CL:0000066!1.18e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002336;1.55e-98;1!CL:0002261;1.55e-98;1!CL:0002170;1.55e-98;1!CL:0002231;5.04e-34;3!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0002076;9.56e-12;42 | |ontology_enrichment_celltype_v019=CL:0002336;1.55e-98;1!CL:0002261;1.55e-98;1!CL:0002170;1.55e-98;1!CL:0002231;5.04e-34;3!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0002076;9.56e-12;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002336,2.55e-98,1;CL:0002261,2.55e-98,1;CL:0002170,2.55e-98,1;CL:0002231,4.27e-34,3;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0002076,1.07e-10,42;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6!CL:0000223;3.42e-07;58 | |ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6!CL:0000223;3.42e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!2.31e-12!5;UBERON:0003343!8.47e-09!4;UBERON:0004785!8.47e-09!4 | |ontology_enrichment_uberon=UBERON:0003729!2.31e-12!5;UBERON:0003343!8.47e-09!4;UBERON:0004785!8.47e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.27e-10;11!UBERON:0010147;2.27e-10;11!UBERON:0003937;1.27e-09;12!UBERON:0005399;1.27e-09;12!UBERON:0003729;5.49e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0002367;2.27e-10;11!UBERON:0010147;2.27e-10;11!UBERON:0003937;1.27e-09;12!UBERON:0005399;1.27e-09;12!UBERON:0003729;5.49e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0003729,5.70e-09,13;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15 | |||
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| ||
|short_description=p138@DST | |short_description=p138@DST | ||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p138@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_138_at_DST_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_M22942_5end |
EntrezGene: | DST |
HGNC: | 1090 |
UniProt: | Q03001 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 2.55e-98 | 1 |
endothelial cell of viscerocranial mucosa | 2.55e-98 | 1 |
keratinized cell of the oral mucosa | 2.55e-98 | 1 |
epithelial cell of prostate | 4.27e-34 | 3 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
endo-epithelial cell | 1.07e-10 | 42 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.16e-10 | 11 |
male accessory sex gland | 2.16e-10 | 11 |
embryonic cloacal epithelium | 2.16e-10 | 11 |
epithelium of hindgut | 2.16e-10 | 11 |
urogenital sinus epithelium | 2.16e-10 | 11 |
prostate bud | 2.16e-10 | 11 |
prostate field | 2.16e-10 | 11 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
mouth mucosa | 5.70e-09 | 13 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |