FFCP PHASE1:Hg19::chr20:62708461..62708503,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:62708461..62708503,-
|short_description=p7@RGS19
|description=CAGE_peak_7_at_RGS19_5end
|association_with_transcript=-220bp_to_AB590132,DQ891204,DQ894387_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10287 | |EntrezGene=10287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13735 | |HGNC=13735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-220bp_to_AB590132,DQ891204,DQ894387_5end | |||
|cluster_id=chr20:62708461..62708503,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_7_at_RGS19_5end | |||
|id=chr20:62708461..62708503,- | |||
|ontology_enrichment_celltype=CL:0000763!1.99e-54!112;CL:0000049!1.99e-54!112;CL:0000037!3.31e-49!172;CL:0000566!3.31e-49!172;CL:0002032!3.88e-45!165;CL:0000837!3.88e-45!165;CL:0000988!6.21e-45!182;CL:0000766!1.08e-44!76;CL:0002057!2.38e-41!42;CL:0000860!1.09e-37!45;CL:0000738!3.07e-34!140;CL:0002194!1.94e-33!63;CL:0000576!1.94e-33!63;CL:0000040!1.94e-33!63;CL:0000559!1.94e-33!63;CL:0000839!2.22e-33!70;CL:0000557!1.08e-32!71;CL:0002009!5.79e-32!65;CL:0002087!9.50e-27!119;CL:0002031!9.27e-24!124;CL:0000094!2.40e-12!8;CL:0000134!5.30e-10!358;CL:0002320!2.24e-09!365;CL:0002393!1.23e-08!9;CL:0002397!1.23e-08!9;CL:0000081!1.99e-08!11;CL:0000219!3.07e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.98e-24;33!CL:0002057;6.98e-24;33!CL:0000576;1.79e-22;48!CL:0000763;2.54e-17;100!CL:0000473;3.73e-15;39!CL:0000234;3.73e-15;39!CL:0000875;1.14e-14;3!CL:0002396;1.14e-14;3!CL:0000766;5.15e-14;69!CL:0000094;1.30e-13;8!CL:0000771;3.99e-10;2!CL:0000081;8.15e-10;11!CL:0002393;2.22e-07;6!CL:0002397;2.22e-07;6!CL:0000988;6.08e-07;177!CL:0000775;6.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.95e-43,108;CL:0000049,2.95e-43,108;CL:0000860,3.63e-40,42;CL:0002057,3.63e-40,42;CL:0000473,1.71e-34,48;CL:0000234,1.71e-34,48;CL:0000766,9.87e-34,72;CL:0002032,4.81e-30,161;CL:0000837,4.81e-30,161;CL:0000037,1.89e-28,168;CL:0000988,1.38e-26,177;CL:0002194,1.47e-26,59;CL:0000576,1.47e-26,59;CL:0000040,1.47e-26,59;CL:0000559,1.47e-26,59;CL:0002009,1.56e-25,61;CL:0000839,3.03e-23,66;CL:0000557,7.93e-23,67;CL:0002393,5.97e-18,9;CL:0002397,5.97e-18,9;CL:0000738,6.30e-18,136;CL:0000875,1.14e-14,3;CL:0002396,1.14e-14,3;CL:0002087,5.55e-14,115;CL:0000094,1.58e-13,8;CL:0002031,3.51e-13,120;CL:0000771,4.27e-10,2;CL:0000081,9.39e-10,11;CL:0000134,3.87e-09,354;CL:0002320,8.42e-09,361;CL:0000219,1.29e-07,386;CL:0000775,6.52e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-27;42!CL:0000049;2.27e-14;108 | |||
|ontology_enrichment_disease=DOID:8692!4.38e-18!31;DOID:1240!1.17e-15!39;DOID:2531!3.29e-13!51;DOID:0060083!3.29e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.65e-11;31!DOID:1240;4.07e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.35e-12,31;DOID:1240,4.90e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-38!102;UBERON:0003061!2.08e-38!102;UBERON:0002193!3.46e-33!112;UBERON:0002371!7.72e-29!80;UBERON:0001474!9.48e-26!86;UBERON:0002405!2.45e-21!115;UBERON:0004765!1.08e-19!101;UBERON:0001434!1.08e-19!101;UBERON:0007023!2.01e-11!115;UBERON:0003081!9.02e-11!216;UBERON:0002384!1.55e-08!375;UBERON:0002204!3.58e-07!167;UBERON:0001049!3.98e-07!57;UBERON:0005068!3.98e-07!57;UBERON:0006241!3.98e-07!57;UBERON:0007135!3.98e-07!57;UBERON:0001893!9.74e-07!34;UBERON:0000178!9.86e-07!15;UBERON:0000179!9.86e-07!15;UBERON:0000463!9.86e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.05e-27,98;UBERON:0003061,7.05e-27,98;UBERON:0002193,8.47e-24,108;UBERON:0002371,1.46e-19,76;UBERON:0002405,1.66e-18,93;UBERON:0001474,8.83e-18,82;UBERON:0004765,8.96e-16,90;UBERON:0001434,1.02e-13,100;UBERON:0003081,1.25e-10,203;UBERON:0002384,2.42e-08,371 | |||
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| ||
|short_description=p7@RGS19 | |||
}} | }} |
Latest revision as of 15:18, 17 September 2015
Short description: | p7@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RGS19_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -220bp_to_AB590132, DQ891204, DQ894387_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.05e-27 | 98 |
blood island | 7.05e-27 | 98 |
hemolymphoid system | 8.47e-24 | 108 |
bone marrow | 1.46e-19 | 76 |
immune system | 1.66e-18 | 93 |
bone element | 8.83e-18 | 82 |
skeletal element | 8.96e-16 | 90 |
skeletal system | 1.02e-13 | 100 |
lateral plate mesoderm | 1.25e-10 | 203 |
connective tissue | 2.42e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.35e-12 | 31 |
leukemia | 4.90e-09 | 39 |