FFCP PHASE1:Hg19::chr1:204276504..204276527,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:204276504..204276527,- | |||
|description=CAGE_peak_at_chr1:204276504..204276527,- | |description=CAGE_peak_at_chr1:204276504..204276527,- | ||
|id=chr1:204276504..204276527,- | |id=chr1:204276504..204276527,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000197;3.64e-17;6!CL:0000098;3.64e-17;6!CL:0002167;3.64e-17;6!CL:0002599;4.72e-08;1!CL:0002550;7.50e-08;1 | |ontology_enrichment_celltype_v019=CL:0000197;3.64e-17;6!CL:0000098;3.64e-17;6!CL:0002167;3.64e-17;6!CL:0002599;4.72e-08;1!CL:0002550;7.50e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.97e-17,6;CL:0000098,2.97e-17,6;CL:0002167,2.97e-17,6;CL:0002599,4.57e-08,1;CL:0002550,7.76e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.27e-08;1!UBERON:0009143;1.74e-07;1!UBERON:0001045;1.74e-07;1 | |ontology_enrichment_development_v019=UBERON:0010115;4.27e-08;1!UBERON:0009143;1.74e-07;1!UBERON:0001045;1.74e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;7.50e-08;1!DOID:10165;7.50e-08;1!DOID:1798;7.50e-08;1 | |ontology_enrichment_disease_v019=DOID:1799;7.50e-08;1!DOID:10165;7.50e-08;1!DOID:1798;7.50e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,8.84e-08,1;DOID:10165,8.84e-08,1;DOID:1798,8.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.92e-28!115;UBERON:0000475!4.27e-12!365 | |ontology_enrichment_uberon=UBERON:0007023!7.92e-28!115;UBERON:0000475!4.27e-12!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;1.59e-09;3!UBERON:0002363;4.27e-08;1!UBERON:0000996;5.76e-08;1!UBERON:0001154;1.74e-07;1!UBERON:0001389;1.74e-07;1!UBERON:0001153;1.74e-07;1!UBERON:0002171;1.74e-07;1!UBERON:0000026;1.74e-07;1!UBERON:0008784;1.74e-07;1!UBERON:0006058;1.74e-07;1!UBERON:0009854;1.74e-07;1!UBERON:0003663;1.74e-07;1!UBERON:0004256;1.74e-07;1!UBERON:0004708;1.74e-07;1!UBERON:0002101;1.74e-07;1!UBERON:0004709;1.74e-07;1!UBERON:0006518;1.74e-07;1!UBERON:0008949;1.74e-07;1!UBERON:0002529;1.74e-07;1!UBERON:0010538;1.74e-07;1!UBERON:0003661;1.74e-07;1!UBERON:0010890;1.74e-07;1!UBERON:0002471;1.74e-07;1!UBERON:0001383;1.74e-07;1!UBERON:0000101;1.74e-07;1!UBERON:0010758;1.74e-07;1!UBERON:0010707;1.74e-07;1!UBERON:0000978;1.74e-07;1!UBERON:0002103;1.74e-07;1!UBERON:0001665;1.74e-07;1!UBERON:0003823;1.74e-07;1!UBERON:0000154;1.74e-07;1!UBERON:0010709;1.74e-07;1!UBERON:0002167;1.74e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001043;1.59e-09;3!UBERON:0002363;4.27e-08;1!UBERON:0000996;5.76e-08;1!UBERON:0001154;1.74e-07;1!UBERON:0001389;1.74e-07;1!UBERON:0001153;1.74e-07;1!UBERON:0002171;1.74e-07;1!UBERON:0000026;1.74e-07;1!UBERON:0008784;1.74e-07;1!UBERON:0006058;1.74e-07;1!UBERON:0009854;1.74e-07;1!UBERON:0003663;1.74e-07;1!UBERON:0004256;1.74e-07;1!UBERON:0004708;1.74e-07;1!UBERON:0002101;1.74e-07;1!UBERON:0004709;1.74e-07;1!UBERON:0006518;1.74e-07;1!UBERON:0008949;1.74e-07;1!UBERON:0002529;1.74e-07;1!UBERON:0010538;1.74e-07;1!UBERON:0003661;1.74e-07;1!UBERON:0010890;1.74e-07;1!UBERON:0002471;1.74e-07;1!UBERON:0001383;1.74e-07;1!UBERON:0000101;1.74e-07;1!UBERON:0010758;1.74e-07;1!UBERON:0010707;1.74e-07;1!UBERON:0000978;1.74e-07;1!UBERON:0002103;1.74e-07;1!UBERON:0001665;1.74e-07;1!UBERON:0003823;1.74e-07;1!UBERON:0000154;1.74e-07;1!UBERON:0010709;1.74e-07;1!UBERON:0002167;1.74e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,1.40e-09,3;UBERON:0009143,1.40e-09,3;UBERON:0002363,4.28e-08,1;UBERON:0007645,4.28e-08,1;UBERON:0007647,4.28e-08,1;UBERON:0010115,4.28e-08,1;UBERON:0000996,5.58e-08,1;UBERON:0001154,1.07e-07,1;UBERON:0001153,1.07e-07,1;UBERON:0001045,1.07e-07,1;UBERON:0005418,1.22e-07,1;UBERON:0001389,1.22e-07,1;UBERON:0000026,1.22e-07,1;UBERON:0008784,1.22e-07,1;UBERON:0006058,1.22e-07,1;UBERON:0003663,1.22e-07,1;UBERON:0004256,1.22e-07,1;UBERON:0004708,1.22e-07,1;UBERON:0002101,1.22e-07,1;UBERON:0004709,1.22e-07,1;UBERON:0002529,1.22e-07,1;UBERON:0010538,1.22e-07,1;UBERON:0003661,1.22e-07,1;UBERON:0010890,1.22e-07,1;UBERON:0002471,1.22e-07,1;UBERON:0001383,1.22e-07,1;UBERON:0004357,1.22e-07,1;UBERON:0004347,1.22e-07,1;UBERON:0005420,1.22e-07,1;UBERON:0005732,1.22e-07,1;UBERON:0010758,1.22e-07,1;UBERON:0010707,1.22e-07,1;UBERON:0000978,1.22e-07,1;UBERON:0002103,1.22e-07,1;UBERON:0001665,1.22e-07,1;UBERON:0003823,1.22e-07,1;UBERON:0000154,1.22e-07,1;UBERON:0010709,1.22e-07,1;UBERON:0005733,1.22e-07,1;UBERON:0005730,1.22e-07,1;UBERON:0002171,1.58e-07,1;UBERON:0006518,1.58e-07,1;UBERON:0008949,1.58e-07,1;UBERON:0000101,1.58e-07,1;UBERON:0002167,1.58e-07,1 | |||
|phase1_expression=1.09007027562334,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10889288650417,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.717558542755448,0,0.635795703478686,0.300091096084402,0.515262646192195,1.03056216018252,0.558350568994769,0,0,1.26216887122057,1.10459878370759,1.93975268182574,0,0,0.67824236924195,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.57191197463259,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,1.07057393278297,3.31175071571263,2.45996971484698,2.10662269809403,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,1.02359116524534,0,0,0,0.539617372749944,0,0.589062011728432,0,0,0,5.36397112998549,0,0,0,1.1312434556297,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0,5.30296980092538,1.34636466614658,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39282981653309,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.26085721434945,0,0.90392296312213,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,2.75395187618069,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,1.28767814440971,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0.643012593860077,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,2.1437183414724,0.321146125482298,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.300841313397029,0,0,2.09525355585138,0,0,0.202612753855184,0,0,0.253663240775627,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0,0.394636641377094,0,0,0.470958557103084,0,0,0,0,0,4.21711610642272,0,0,0,0,0.414432328326074,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.615976841137482,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.980593287015622,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0.515663103788617,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.339957450954573,0,0.5290268405154,0,0.924351257262837,0,0.252332849670158,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,0.151557396436479,0,0,0.20686599172379,0,0,0.0645889098360061,0.124149428591716,0,0.572824424503484,0,0.217716747896961,0,0.336760265072938,0.430333232356058,0,0,0,0,0,0,0,0,3.32878387092756,0.603821380773079,0 | |phase1_expression=1.09007027562334,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10889288650417,0,0,0,0.117434498643765,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0.717558542755448,0,0.635795703478686,0.300091096084402,0.515262646192195,1.03056216018252,0.558350568994769,0,0,1.26216887122057,1.10459878370759,1.93975268182574,0,0,0.67824236924195,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.57191197463259,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,1.07057393278297,3.31175071571263,2.45996971484698,2.10662269809403,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,1.02359116524534,0,0,0,0.539617372749944,0,0.589062011728432,0,0,0,5.36397112998549,0,0,0,1.1312434556297,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0,5.30296980092538,1.34636466614658,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39282981653309,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.26085721434945,0,0.90392296312213,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,2.75395187618069,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,1.28767814440971,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0.643012593860077,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,2.1437183414724,0.321146125482298,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.300841313397029,0,0,2.09525355585138,0,0,0.202612753855184,0,0,0.253663240775627,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0,0.394636641377094,0,0,0.470958557103084,0,0,0,0,0,4.21711610642272,0,0,0,0,0.414432328326074,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,1.29485767437579,0.615976841137482,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.980593287015622,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0.515663103788617,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.339957450954573,0,0.5290268405154,0,0.924351257262837,0,0.252332849670158,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,0.151557396436479,0,0,0.20686599172379,0,0,0.0645889098360061,0.124149428591716,0,0.572824424503484,0,0.217716747896961,0,0.336760265072938,0.430333232356058,0,0,0,0,0,0,0,0,3.32878387092756,0.603821380773079,0 | ||
|short_description=p@chr1:204276504..204276527,- | |short_description=p@chr1:204276504..204276527,- | ||
}} | }} |
Latest revision as of 02:35, 28 July 2015
Short description: | p@chr1:204276504..204276527, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:204276504..204276527, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.97e-17 | 6 |
sensory epithelial cell | 2.97e-17 | 6 |
olfactory epithelial cell | 2.97e-17 | 6 |
smooth muscle cell of the esophagus | 4.57e-08 | 1 |
fibroblast of the conjuctiva | 7.76e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.84e-08 | 1 |
endocrine pancreas cancer | 8.84e-08 | 1 |
pancreatic endocrine carcinoma | 8.84e-08 | 1 |