FFCP PHASE1:Hg19::chr10:104408911..104408922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81603 | |EntrezGene=81603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15579 | |HGNC=15579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000487927_5end | |association_with_transcript=-53bp_to_ENST00000487927_5end | ||
|cluster_id=chr10:104408911..104408922,+ | |||
|coexpression_cluster_id=C78 | |coexpression_cluster_id=C78 | ||
|description=CAGE_peak_33_at_TRIM8_5end | |description=CAGE_peak_33_at_TRIM8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!3.33e-12!24;CL:0000826!3.33e-12!24;CL:0000946!1.48e-09!1;CL:0000786!1.48e-09!1;CL:0000980!1.48e-09!1;CL:0002574!2.08e-09!1 | |ontology_enrichment_celltype=CL:0000945!3.33e-12!24;CL:0000826!3.33e-12!24;CL:0000946!1.48e-09!1;CL:0000786!1.48e-09!1;CL:0000980!1.48e-09!1;CL:0002574!2.08e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.01e-09;24 | |ontology_enrichment_celltype_v019=CL:0000945;1.01e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.01e-09,24;CL:0000826,1.01e-09,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:630!4.09e-10!1;DOID:0050177!4.09e-10!1;DOID:0050427!4.09e-10!1;DOID:8552!9.70e-10!1 | |ontology_enrichment_disease=DOID:630!4.09e-10!1;DOID:0050177!4.09e-10!1;DOID:0050427!4.09e-10!1;DOID:8552!9.70e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | |ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002360!2.04e-17!2;UBERON:0000094!2.04e-17!2;UBERON:0007645!2.04e-17!2;UBERON:0004177!1.94e-11!7;UBERON:0002372!6.31e-10!1;UBERON:0001961!6.31e-10!1;UBERON:0001744!6.31e-10!1;UBERON:0001735!6.31e-10!1;UBERON:0002022!1.36e-09!1;UBERON:0002370!1.49e-09!4;UBERON:0005058!1.49e-09!4;UBERON:0009113!1.49e-09!4;UBERON:0003295!1.49e-09!4;UBERON:0005562!1.49e-09!4;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0001042!2.78e-08!10;UBERON:0009145!2.78e-08!10;UBERON:0006562!1.43e-07!11 | |ontology_enrichment_uberon=UBERON:0002360!2.04e-17!2;UBERON:0000094!2.04e-17!2;UBERON:0007645!2.04e-17!2;UBERON:0004177!1.94e-11!7;UBERON:0002372!6.31e-10!1;UBERON:0001961!6.31e-10!1;UBERON:0001744!6.31e-10!1;UBERON:0001735!6.31e-10!1;UBERON:0002022!1.36e-09!1;UBERON:0002370!1.49e-09!4;UBERON:0005058!1.49e-09!4;UBERON:0009113!1.49e-09!4;UBERON:0003295!1.49e-09!4;UBERON:0005562!1.49e-09!4;UBERON:0002363!2.67e-09!1;UBERON:0007647!2.67e-09!1;UBERON:0010115!2.67e-09!1;UBERON:0001042!2.78e-08!10;UBERON:0009145!2.78e-08!10;UBERON:0006562!1.43e-07!11 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p33@TRIM8 | |short_description=p33@TRIM8 | ||
}} | }} |
Latest revision as of 01:55, 16 September 2015
Short description: | p33@TRIM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_TRIM8_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -53bp_to_ENST00000487927_5end |
EntrezGene: | TRIM8 |
HGNC: | 15579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.01e-09 | 24 |
pro-B cell | 1.01e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.81e-21 | 10 |