FFCP PHASE1:Hg19::chr15:85525255..85525308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5151 | |EntrezGene=5151 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8793 | |HGNC=8793 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIJ0 | |UniProt=E9PIJ0 | ||
|association_with_transcript=43bp_to_ENST00000339708,ENST00000478717,ENST00000485596,ENST00000559742_5end | |association_with_transcript=43bp_to_ENST00000339708,ENST00000478717,ENST00000485596,ENST00000559742_5end | ||
|cluster_id=chr15:85525255..85525308,+ | |||
|description=CAGE_peak_3_at_PDE8A_5end | |description=CAGE_peak_3_at_PDE8A_5end | ||
|id=chr15:85525255..85525308,+ | |id=chr15:85525255..85525308,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-09!115;UBERON:0002616!4.22e-09!59;UBERON:0001049!6.37e-09!57;UBERON:0005068!6.37e-09!57;UBERON:0006241!6.37e-09!57;UBERON:0007135!6.37e-09!57;UBERON:0000955!9.64e-08!69;UBERON:0006238!9.64e-08!69;UBERON:0003080!1.31e-07!42;UBERON:0002780!3.16e-07!41;UBERON:0001890!3.16e-07!41;UBERON:0006240!3.16e-07!41;UBERON:0001893!9.32e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!3.98e-09!115;UBERON:0002616!4.22e-09!59;UBERON:0001049!6.37e-09!57;UBERON:0005068!6.37e-09!57;UBERON:0006241!6.37e-09!57;UBERON:0007135!6.37e-09!57;UBERON:0000955!9.64e-08!69;UBERON:0006238!9.64e-08!69;UBERON:0003080!1.31e-07!42;UBERON:0002780!3.16e-07!41;UBERON:0001890!3.16e-07!41;UBERON:0006240!3.16e-07!41;UBERON:0001893!9.32e-07!34 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.99e-09,114;UBERON:0001049,3.49e-09,56;UBERON:0005068,3.49e-09,56;UBERON:0006241,3.49e-09,56;UBERON:0007135,3.49e-09,56;UBERON:0000073,5.54e-08,53;UBERON:0002616,5.54e-08,53;UBERON:0000955,1.44e-07,68;UBERON:0006238,1.44e-07,68;UBERON:0002780,1.48e-07,41;UBERON:0001890,1.48e-07,41;UBERON:0003080,1.48e-07,41;UBERON:0006240,1.48e-07,41;UBERON:0001893,4.09e-07,34;UBERON:0003075,4.86e-07,82;UBERON:0007284,4.86e-07,82;UBERON:0003528,5.30e-07,34;UBERON:0002020,5.30e-07,34;UBERON:0001017,7.90e-07,81 | |||
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| ||
|short_description=p3@PDE8A | |short_description=p3@PDE8A | ||
}} | }} |
Latest revision as of 13:24, 19 September 2015
Short description: | p3@PDE8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDE8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000339708, ENST00000478717, ENST00000485596, ENST00000559742_5end |
EntrezGene: | PDE8A |
HGNC: | 8793 |
UniProt: | E9PIJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.99e-09 | 114 |
neural tube | 3.49e-09 | 56 |
neural rod | 3.49e-09 | 56 |
future spinal cord | 3.49e-09 | 56 |
neural keel | 3.49e-09 | 56 |
regional part of nervous system | 5.54e-08 | 53 |
regional part of brain | 5.54e-08 | 53 |
brain | 1.44e-07 | 68 |
future brain | 1.44e-07 | 68 |
regional part of forebrain | 1.48e-07 | 41 |
forebrain | 1.48e-07 | 41 |
anterior neural tube | 1.48e-07 | 41 |
future forebrain | 1.48e-07 | 41 |
telencephalon | 4.09e-07 | 34 |
neural plate | 4.86e-07 | 82 |
presumptive neural plate | 4.86e-07 | 82 |
brain grey matter | 5.30e-07 | 34 |
gray matter | 5.30e-07 | 34 |
central nervous system | 7.90e-07 | 81 |