FFCP PHASE1:Hg19::chr1:37942160..37942182,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:37942160..37942182,- | |||
|description=CAGE_peak_at_chr1:37942160..37942182,- | |description=CAGE_peak_at_chr1:37942160..37942182,- | ||
|id=chr1:37942160..37942182,- | |id=chr1:37942160..37942182,- | ||
|ontology_enrichment_celltype=CL:0002057!8.17e-08!42;CL:0000860!1.08e-07!45 | |ontology_enrichment_celltype=CL:0002057!8.17e-08!42;CL:0000860!1.08e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.75e-18;33!CL:0002057;1.75e-18;33!CL:0001014;3.39e-14;2!CL:0001016;3.39e-14;2!CL:0002593;1.01e-13;2!CL:0000473;3.38e-13;39!CL:0000234;3.38e-13;39!CL:0000576;6.13e-08;48!CL:0000319;7.03e-08;1 | |ontology_enrichment_celltype_v019=CL:0000860;1.75e-18;33!CL:0002057;1.75e-18;33!CL:0001014;3.39e-14;2!CL:0001016;3.39e-14;2!CL:0002593;1.01e-13;2!CL:0000473;3.38e-13;39!CL:0000234;3.38e-13;39!CL:0000576;6.13e-08;48!CL:0000319;7.03e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.24e-16,42;CL:0002057,3.24e-16,42;CL:0002009,8.54e-15,61;CL:0001014,2.88e-14,2;CL:0001016,2.88e-14,2;CL:0000473,6.17e-14,48;CL:0000234,6.17e-14,48;CL:0002593,1.54e-13,2;CL:0000557,2.90e-13,67;CL:0002194,9.54e-11,59;CL:0000576,9.54e-11,59;CL:0000040,9.54e-11,59;CL:0000559,9.54e-11,59;CL:0000766,3.63e-10,72;CL:0000839,2.04e-09,66;CL:0000763,1.27e-08,108;CL:0000049,1.27e-08,108;CL:0000319,7.26e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-12;42!UBERON:0010115;2.10e-07;1 | |ontology_enrichment_development_v019=CL:0002057;4.95e-12;42!UBERON:0010115;2.10e-07;1 | ||
|ontology_enrichment_disease=DOID:305!4.22e-07!106 | |ontology_enrichment_disease=DOID:305!4.22e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3030;7.03e-08;1!DOID:5662;2.10e-07;1 | |ontology_enrichment_disease_v019=DOID:3030;7.03e-08;1!DOID:5662;2.10e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,7.26e-08,1;DOID:5662,1.58e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.41e-07!448;UBERON:0004120!1.41e-07!448;UBERON:0006603!1.41e-07!448;UBERON:0002204!8.37e-07!167 | |ontology_enrichment_uberon=UBERON:0000926!1.41e-07!448;UBERON:0004120!1.41e-07!448;UBERON:0006603!1.41e-07!448;UBERON:0002204!8.37e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.01e-13;2!UBERON:0001282;1.07e-07;1!UBERON:0009842;1.07e-07;1!UBERON:0003704;1.07e-07;1!UBERON:0001171;1.07e-07;1!UBERON:0001172;1.07e-07;1!UBERON:0002363;2.10e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002456;1.01e-13;2!UBERON:0001282;1.07e-07;1!UBERON:0009842;1.07e-07;1!UBERON:0003704;1.07e-07;1!UBERON:0001171;1.07e-07;1!UBERON:0001172;1.07e-07;1!UBERON:0002363;2.10e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.54e-13,2;UBERON:0002371,2.04e-11,76;UBERON:0001474,2.08e-10,82;UBERON:0001434,1.56e-09,100;UBERON:0004765,2.83e-09,90;UBERON:0002405,6.73e-09,93;UBERON:0002204,1.59e-08,167;UBERON:0002390,2.53e-08,98;UBERON:0003061,2.53e-08,98;UBERON:0001282,1.22e-07,1;UBERON:0009842,1.22e-07,1;UBERON:0003704,1.22e-07,1;UBERON:0001171,1.22e-07,1;UBERON:0001172,1.22e-07,1;UBERON:0002363,2.17e-07,1;UBERON:0007645,2.17e-07,1;UBERON:0007647,2.17e-07,1;UBERON:0010115,2.17e-07,1;UBERON:0002193,2.46e-07,108 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0,0,0,0.242584061187816,0.929716147622738,0,0.619412741790207,0.28769239232215,0,0,0.344745680736619,1.29096936716765,4.06279459783025,0.188242339542605,0,1.12361742222542,0.306083892370903,1.28371610830437,1.27867425159808,0,0,0,2.90209238628584,2.26954089876456,7.4738669879469,0,0.521482918420201,0.217188844705117,3.02699751316684,2.57794345191295,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0,0,0.973269740605272,0.0945348171640679,0,0,0.0654895377488563,0,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0.335964256397719,0,0.0895585227028483,0.290633938513962,0,0,0,0.414656231081544,0,0.6312121671319,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.640365346820666,0,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0.580066775656914,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.765676274967505,0.2023155617111,0,0,0,0.924100740528266,0,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,2.35484592059769,0.179872457583315,0,0,0.202182481573316,0,0,0,4.6305563029944,1.05650146756755,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0.211107635297664,1.97576935775941,0,0,0.769776901804097,0,1.08890984861323,0.282431402330337,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,2.27884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,1.14262965711403,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0.664653872707185,0,0.313932918407225,0,1.13843818411917,0,0,0.489961987071888,0.0870592065804026,0,0,0,0.65780385377567,0,0,0,0,0,0,0,0.391102765469606,0.480952921509202,0,0.19980960958213,0,0,0,0.14405479798815,0.372757606696298,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,4.94942561413301,3.86900977278975,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0.249960815924213,0,0,0.470531639396343,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.545545977607678,0.214821114084977,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,1.71553273099941,0,0.453411851024545,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0.38582807654183,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0,3.19504781379835,0.211312123358627,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,3.19406069098988,0,0,0,0,0,0,1.54339208493677,0,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0.828864656652147,0,0.691259661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| ||
|short_description=p@chr1:37942160..37942182,- | |short_description=p@chr1:37942160..37942182,- | ||
}} | }} |
Latest revision as of 07:52, 28 July 2015
Short description: | p@chr1:37942160..37942182, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:37942160..37942182, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.24e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.24e-16 | 42 |
macrophage dendritic cell progenitor | 8.54e-15 | 61 |
CD1a-positive Langerhans cell | 2.88e-14 | 2 |
immature CD1a-positive Langerhans cell | 2.88e-14 | 2 |
defensive cell | 6.17e-14 | 48 |
phagocyte | 6.17e-14 | 48 |
smooth muscle cell of the internal thoracic artery | 1.54e-13 | 2 |
granulocyte monocyte progenitor cell | 2.90e-13 | 67 |
monopoietic cell | 9.54e-11 | 59 |
monocyte | 9.54e-11 | 59 |
monoblast | 9.54e-11 | 59 |
promonocyte | 9.54e-11 | 59 |
myeloid leukocyte | 3.63e-10 | 72 |
myeloid lineage restricted progenitor cell | 2.04e-09 | 66 |
myeloid cell | 1.27e-08 | 108 |
common myeloid progenitor | 1.27e-08 | 108 |
mucus secreting cell | 7.26e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.54e-13 | 2 |
bone marrow | 2.04e-11 | 76 |
bone element | 2.08e-10 | 82 |
skeletal system | 1.56e-09 | 100 |
skeletal element | 2.83e-09 | 90 |
immune system | 6.73e-09 | 93 |
musculoskeletal system | 1.59e-08 | 167 |
hematopoietic system | 2.53e-08 | 98 |
blood island | 2.53e-08 | 98 |
intralobular bile duct | 1.22e-07 | 1 |
acinus | 1.22e-07 | 1 |
intrahepatic bile duct | 1.22e-07 | 1 |
portal lobule | 1.22e-07 | 1 |
hepatic acinus | 1.22e-07 | 1 |
dura mater | 2.17e-07 | 1 |
future meninx | 2.17e-07 | 1 |
ectomeninx | 2.17e-07 | 1 |
future dura mater | 2.17e-07 | 1 |
hemolymphoid system | 2.46e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.26e-08 | 1 |
pleomorphic carcinoma | 1.58e-07 | 1 |