FFCP PHASE1:Hg19::chr20:61464184..61464214,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:61464184..61464214,+
|short_description=p3@COL9A3
|description=CAGE_peak_3_at_COL9A3_5end
|association_with_transcript=0bp_to_ENST00000469802,ENST00000472...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1299 | |EntrezGene=1299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2219 | |HGNC=2219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469802,ENST00000472880_5end | |||
|cluster_id=chr20:61464184..61464214,+ | |||
|description=CAGE_peak_3_at_COL9A3_5end | |||
|id=chr20:61464184..61464214,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.87e-28!172;CL:0000566!5.87e-28!172;CL:0002032!7.61e-25!165;CL:0000837!7.61e-25!165;CL:0000988!1.01e-24!182;CL:0000738!1.80e-21!140;CL:0000945!4.04e-19!24;CL:0000826!4.04e-19!24;CL:0002087!7.16e-19!119;CL:0002031!1.10e-14!124;CL:0000763!2.37e-14!112;CL:0000049!2.37e-14!112;CL:0000236!2.10e-13!14;CL:0000542!2.43e-10!53;CL:0000051!2.43e-10!53;CL:0000766!4.53e-10!76;CL:0000838!1.16e-09!52;CL:0002194!6.96e-08!63;CL:0000576!6.96e-08!63;CL:0000040!6.96e-08!63;CL:0000559!6.96e-08!63;CL:0002009!2.25e-07!65;CL:0000094!6.43e-07!8;CL:0000839!9.51e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.11e-26;24!CL:0000236;1.80e-24;13!CL:0000094;9.87e-12;8!CL:0000542;3.41e-11;53!CL:0000775;3.49e-09;3!CL:0000081;2.57e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.06e-26,24;CL:0000826,3.06e-26,24;CL:0000236,1.26e-22,14;CL:0002032,1.03e-16,161;CL:0000837,1.03e-16,161;CL:0000037,1.35e-16,168;CL:0000988,3.32e-15,177;CL:0000542,9.72e-14,53;CL:0000051,9.72e-14,53;CL:0000738,1.73e-12,136;CL:0000838,1.86e-12,52;CL:0000094,7.00e-12,8;CL:0002087,1.21e-09,115;CL:0000775,2.86e-09,3;CL:0000081,2.02e-08,11;CL:0002031,2.49e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.41e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!1.10e-15!51;DOID:0060083!1.10e-15!51;DOID:1240!1.90e-13!39;DOID:8692!1.26e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.94e-10;39!DOID:8692;3.49e-09;31!DOID:2531;5.18e-09;51!DOID:0060083;5.18e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.70e-15,51;DOID:0060083,2.70e-15,51;DOID:1240,5.99e-13,39;DOID:8692,2.30e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.89e-11!102;UBERON:0003061!1.89e-11!102;UBERON:0002193!2.04e-10!112;UBERON:0000178!1.03e-09!15;UBERON:0000179!1.03e-09!15;UBERON:0000463!1.03e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.30e-17;15!UBERON:0000179;7.30e-17;15!UBERON:0000463;7.30e-17;15!UBERON:0002390;4.53e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.24e-17,15;UBERON:0000179,6.24e-17,15;UBERON:0000463,6.24e-17,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.314843125254717,1.57345710739562,0,0.309632246632152,0,0,0,2.01414721508784,0.284338464974843,0,1.10799081706375,0.601633342410425,0,0,0,0,0.726991193897824,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0.564727018627814,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0.628975936525128,1.90958672949042,0.150176892841506,0.803627933485401,1.42506371870624,0,0.365328307529268,0,5.46138611262132,7.11607403090844,6.40095333849761,7.20712776664822,8.62128659931725,8.59358334620321,6.67837628174755,2.27685187643779,0.587237189370939,1.91136614062614,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0.324547393654683,0.522389211897802,0.132957960518865,1.66943437013739,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.662648841607426,1.16193942869518,1.0366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0,0.653638332277218,0,0.269662616320329,0.392442930250692,0.769494313892781,0,0,0,0,1.26755034821831,0,2.95394953340702,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,2.60279707715243,0,5.52803675603351,0.637938751653163,2.99602809578873,17.9496875522415,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.12972560932135,0,0,0,0,7.10426652925037,6.88173486428138,3.98753031021914,10.4821981201427,6.58179636937911,11.0240462902762,7.02040868409549,3.96562588147135,0.106824071127473,0,0.245040215981032,4.27347302789153,9.52176805644536,1.06712765022621,0.318852545457645,0.59873811429845,0,1.2700414963433,0,0.280797178113459,0.456469358066384,0,0,0,0.963528450622197,1.21079824314629,3.83261613921294,3.43505344755765,5.8375745218607,6.26293102098765,3.33698283423817,2.34465714482448,0,1.23087398947712,0.270455678475983,0,0,0.935702702041099,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,4.42054264849836,0,0,6.52349468943668,0,0.539210106883961,0.358042349351218,4.09257896181497,0.0986434056369336,2.3948309234694,0,0,0,0,0,0.262379999988587,0,0.1137934482855,1.01701460117107,0.709163045303809,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0.32681539055697,0.139423744278603,0,0,0,1.79515288819544,0,0,0,0,1.02193298195737,2.19772358953035,1.16348177330109,0.225595660617181,0.19606253431774,0.167821586975843,0,0.635746315921515,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.134802265961354,0,0,7.29819156862664,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0.489961987071888,0,0,0,3.67674058898524,4.97007356186062,2.46346371159628,0.193978032976839,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,2.85439696392771,0,0,0.272406812223151,0,0.412618309791701,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,1.65695622138878,0.496166021811951,0.988058159489721,3.89736314818867,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45390978296524,9.98846882032731,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0,0,0,0,5.04143392443436,0,0,0,0.294443155503077,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,1.30953347240711,0,0,0.135075169236789,0,0,0,1.09394961803644,0,0,0.175871244359621,0.383287282918786,0,0,0,0,0,0.691403925334676,0,0,0,0,0.778619813244484,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0.33883824611688,0.439762066981716,0.905777061400041,0.463044948647668,0.218559560503957,0,0,0.235676547101626,0,0,0,0,1.03382309777839,0.45120521581504,0.399764623699716,0,0,0.160482733378337,0,0.917458566809082,0,0,0.0679914901909147,0.872701380680755,0,0,0,0,1.13549782351571,1.52971800749174,0,1.32585478664576,0.26721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| 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| ||
|short_description=p3@COL9A3 | |||
}} | }} |
Latest revision as of 11:39, 17 September 2015
Short description: | p3@COL9A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL9A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469802, ENST00000472880_5end |
EntrezGene: | COL9A3 |
HGNC: | 2219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.06e-26 | 24 |
pro-B cell | 3.06e-26 | 24 |
B cell | 1.26e-22 | 14 |
hematopoietic oligopotent progenitor cell | 1.03e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-16 | 161 |
hematopoietic stem cell | 1.35e-16 | 168 |
hematopoietic cell | 3.32e-15 | 177 |
lymphocyte | 9.72e-14 | 53 |
common lymphoid progenitor | 9.72e-14 | 53 |
leukocyte | 1.73e-12 | 136 |
lymphoid lineage restricted progenitor cell | 1.86e-12 | 52 |
granulocyte | 7.00e-12 | 8 |
nongranular leukocyte | 1.21e-09 | 115 |
neutrophil | 2.86e-09 | 3 |
blood cell | 2.02e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 2.49e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 6.24e-17 | 15 |
haemolymphatic fluid | 6.24e-17 | 15 |
organism substance | 6.24e-17 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.70e-15 | 51 |
immune system cancer | 2.70e-15 | 51 |
leukemia | 5.99e-13 | 39 |
myeloid leukemia | 2.30e-09 | 31 |