FFCP PHASE1:Hg19::chr12:79611273..79611298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt=P21579 | |UniProt=P21579 | ||
|association_with_transcript=0bp_to_M55047_5end | |association_with_transcript=0bp_to_M55047_5end | ||
|cluster_id=chr12:79611273..79611298,+ | |||
|coexpression_cluster_id=C3335 | |coexpression_cluster_id=C3335 | ||
|description=CAGE_peak_15_at_SYT1_5end | |description=CAGE_peak_15_at_SYT1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!1.79e-08!2 | |ontology_enrichment_celltype=CL:0000242!1.79e-08!2 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000242,2.73e-37,2;CL:0000312,1.40e-15,5;CL:0000240,3.77e-13,6;CL:0000311,3.77e-13,6;CL:0000079,3.77e-13,6;CL:0000237,3.77e-13,6;CL:0000036,3.77e-13,6;CL:0000357,3.77e-13,6;CL:0000114,3.77e-13,6;CL:0000362,4.43e-09,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.77e-13;6!CL:0000114;3.77e-13;6 | |ontology_enrichment_development_v019=CL:0000357;3.77e-13;6!CL:0000114;3.77e-13;6 | ||
|ontology_enrichment_disease=DOID:5409!3.52e-08!4;DOID:1325!8.20e-08!7;DOID:3904!8.20e-08!7 | |ontology_enrichment_disease=DOID:5409!3.52e-08!4;DOID:1325!8.20e-08!7;DOID:3904!8.20e-08!7 | ||
|ontology_enrichment_disease_v019=DOID:0050619;8.95e-20;1!DOID:1357;8.95e-20;1 | |ontology_enrichment_disease_v019=DOID:0050619;8.95e-20;1!DOID:1357;8.95e-20;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.95e-20,1;DOID:1357,8.95e-20,1 | |||
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| ||
|short_description=p15@SYT1 | |short_description=p15@SYT1 | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p15@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SYT1_5end |
Coexpression cluster: | C3335_maxillary_acute_merkel_medial_small_pineal_hippocampus |
Association with transcript: | 0bp_to_M55047_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | P21579 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.73e-37 | 2 |
keratinocyte | 1.40e-15 | 5 |
stratified squamous epithelial cell | 3.77e-13 | 6 |
keratin accumulating cell | 3.77e-13 | 6 |
stratified epithelial cell | 3.77e-13 | 6 |
keratinizing barrier epithelial cell | 3.77e-13 | 6 |
epithelial fate stem cell | 3.77e-13 | 6 |
stratified epithelial stem cell | 3.77e-13 | 6 |
surface ectodermal cell | 3.77e-13 | 6 |
epidermal cell | 4.43e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.95e-20 | 1 |
paranasal sinus | 8.95e-20 | 1 |
gyrus | 5.76e-13 | 6 |
regional part of cerebral cortex | 7.59e-13 | 22 |
cerebral cortex | 2.10e-11 | 25 |
pallium | 2.10e-11 | 25 |
middle frontal gyrus | 2.07e-10 | 2 |
Ammon's horn | 2.49e-10 | 2 |
lobe parts of cerebral cortex | 2.49e-10 | 2 |
hippocampal formation | 2.49e-10 | 2 |
limbic lobe | 2.49e-10 | 2 |
middle temporal gyrus | 2.99e-10 | 2 |
regional part of telencephalon | 4.72e-09 | 32 |
cerebral hemisphere | 4.72e-09 | 32 |
brain grey matter | 1.49e-08 | 34 |
gray matter | 1.49e-08 | 34 |
telencephalon | 1.49e-08 | 34 |
neocortex | 2.51e-08 | 20 |
frontal cortex | 2.32e-07 | 3 |
regional part of forebrain | 3.59e-07 | 41 |
forebrain | 3.59e-07 | 41 |
anterior neural tube | 3.59e-07 | 41 |
future forebrain | 3.59e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.95e-20 | 1 |
maxillary sinus cancer | 8.95e-20 | 1 |