FFCP PHASE1:Hg19::chr5:147582587..147582659,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404203 | |EntrezGene=404203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29486 | |HGNC=29486 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWN8 | |UniProt=Q6UWN8 | ||
|association_with_transcript=183bp_to_ENST00000325630,uc003lpa.2_5end | |association_with_transcript=183bp_to_ENST00000325630,uc003lpa.2_5end | ||
|cluster_id=chr5:147582587..147582659,+ | |||
|coexpression_cluster_id=C106 | |coexpression_cluster_id=C106 | ||
|description=CAGE_peak_1_at_SPINK6_5end | |description=CAGE_peak_1_at_SPINK6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002159!7.02e-14!13;CL:0000154!1.29e-13!6;CL:0000622!1.09e-11!5;CL:0000244!9.55e-10!4;CL:0000731!9.55e-10!4;CL:0002166!4.53e-08!3;CL:0002623!2.55e-07!3;CL:0000066!3.62e-07!254 | |ontology_enrichment_celltype=CL:0002159!7.02e-14!13;CL:0000154!1.29e-13!6;CL:0000622!1.09e-11!5;CL:0000244!9.55e-10!4;CL:0000731!9.55e-10!4;CL:0002166!4.53e-08!3;CL:0002623!2.55e-07!3;CL:0000066!3.62e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.59e-21;14!CL:0000154;5.31e-16;6!CL:0000244;1.96e-15;4!CL:0000731;1.96e-15;4!CL:0000622;7.71e-13;5!CL:0002166;1.50e-12;3!CL:0000317;4.16e-09;2!CL:1000448;4.16e-09;2!CL:0002308;4.16e-09;2!CL:0002140;4.16e-09;2!CL:0000575;5.51e-09;2!CL:0000362;2.71e-07;9!CL:0000150;3.74e-07;9!CL:0002077;3.97e-07;34 | |ontology_enrichment_celltype_v019=CL:0002159;1.59e-21;14!CL:0000154;5.31e-16;6!CL:0000244;1.96e-15;4!CL:0000731;1.96e-15;4!CL:0000622;7.71e-13;5!CL:0002166;1.50e-12;3!CL:0000317;4.16e-09;2!CL:1000448;4.16e-09;2!CL:0002308;4.16e-09;2!CL:0002140;4.16e-09;2!CL:0000575;5.51e-09;2!CL:0000362;2.71e-07;9!CL:0000150;3.74e-07;9!CL:0002077;3.97e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.57e-21,14;CL:0000154,5.15e-16,6;CL:0000244,2.20e-15,4;CL:0000731,2.20e-15,4;CL:0000622,7.95e-13,5;CL:0002166,1.47e-12,3;CL:0000317,4.08e-09,2;CL:1000448,4.08e-09,2;CL:0002308,4.08e-09,2;CL:0002140,4.08e-09,2;CL:0000575,5.40e-09,2;CL:0000066,1.53e-08,253;CL:0002077,6.86e-08,34;CL:0000362,2.73e-07,9;CL:0000150,3.80e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.22e-12;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.22e-12;29 | ||
|ontology_enrichment_disease=DOID:0060084!8.09e-08!3;DOID:127!8.09e-08!3 | |ontology_enrichment_disease=DOID:0060084!8.09e-08!3;DOID:127!8.09e-08!3 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.17e-22!9;UBERON:0001557!8.65e-14!19;UBERON:0001004!8.83e-11!72;UBERON:0001044!6.53e-09!6;UBERON:0003293!6.53e-09!6;UBERON:0003294!6.53e-09!6;UBERON:0010047!6.53e-09!6;UBERON:0000167!6.53e-09!6;UBERON:0005795!3.58e-08!22;UBERON:0004119!3.94e-08!169;UBERON:0000925!3.94e-08!169;UBERON:0006595!3.94e-08!169;UBERON:0000072!5.01e-08!46;UBERON:0000365!8.87e-08!5;UBERON:0000065!1.70e-07!53;UBERON:0003408!3.73e-07!10;UBERON:0000995!6.69e-07!21;UBERON:0008947!9.57e-07!38;UBERON:0003258!9.57e-07!38 | |ontology_enrichment_uberon=UBERON:0001737!1.17e-22!9;UBERON:0001557!8.65e-14!19;UBERON:0001004!8.83e-11!72;UBERON:0001044!6.53e-09!6;UBERON:0003293!6.53e-09!6;UBERON:0003294!6.53e-09!6;UBERON:0010047!6.53e-09!6;UBERON:0000167!6.53e-09!6;UBERON:0005795!3.58e-08!22;UBERON:0004119!3.94e-08!169;UBERON:0000925!3.94e-08!169;UBERON:0006595!3.94e-08!169;UBERON:0000072!5.01e-08!46;UBERON:0000365!8.87e-08!5;UBERON:0000065!1.70e-07!53;UBERON:0003408!3.73e-07!10;UBERON:0000995!6.69e-07!21;UBERON:0008947!9.57e-07!38;UBERON:0003258!9.57e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-37;9!UBERON:0001557;2.86e-37;9!UBERON:0000365;2.25e-12;5!UBERON:0005910;2.50e-10;6!UBERON:0001708;1.60e-09;4!UBERON:0008895;1.60e-09;4!UBERON:0002419;4.16e-09;2!UBERON:0007771;4.16e-09;2!UBERON:0003297;4.16e-09;2!UBERON:0001821;4.16e-09;2!UBERON:0003487;4.16e-09;2!UBERON:0001820;4.16e-09;2!UBERON:0000072;5.72e-09;37!UBERON:0000065;8.43e-08;44!UBERON:0011159;1.06e-07;5!UBERON:0000486;1.25e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-37;9!UBERON:0001557;2.86e-37;9!UBERON:0000365;2.25e-12;5!UBERON:0005910;2.50e-10;6!UBERON:0001708;1.60e-09;4!UBERON:0008895;1.60e-09;4!UBERON:0002419;4.16e-09;2!UBERON:0007771;4.16e-09;2!UBERON:0003297;4.16e-09;2!UBERON:0001821;4.16e-09;2!UBERON:0003487;4.16e-09;2!UBERON:0001820;4.16e-09;2!UBERON:0000072;5.72e-09;37!UBERON:0000065;8.43e-08;44!UBERON:0011159;1.06e-07;5!UBERON:0000486;1.25e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.87e-37,9;UBERON:0001557,1.06e-16,19;UBERON:0000365,2.47e-12,5;UBERON:0005910,2.70e-10,6;UBERON:0001708,1.57e-09,4;UBERON:0008895,1.57e-09,4;UBERON:0008947,3.74e-09,38;UBERON:0003258,3.74e-09,38;UBERON:0002419,4.08e-09,2;UBERON:0007771,4.08e-09,2;UBERON:0003297,4.08e-09,2;UBERON:0001821,4.08e-09,2;UBERON:0003487,4.08e-09,2;UBERON:0001820,4.08e-09,2;UBERON:0005089,4.08e-09,2;UBERON:0005088,4.08e-09,2;UBERON:0011159,1.05e-07,5;UBERON:0000072,5.07e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,6.9216104775583,9.64039551239516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28820270022815,1.11670113798954,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,185.859982862595,159.481116813884,153.524026035778,200.073266536563,165.806256954321,152.090466850213,253.752521957429,227.420678080276,195.06680857182,0,0,0,0,0,0,0,0,0,0,10.0970262575936,0,5.62962245505133,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,10.3107217385455,4.36753533317035,8.79005602902796,0.53735113621709,1.45316969256981,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,4.41114234667227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76251414593493,13.6512651667669,1.6068392984416,0,0,0,0,0,0,0,0,0.991709492165869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0,3.44404298136984,6.73885902670502,3.99087138183008,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20735660317994,0,2.15012491469462,0,0,0,0,25.3350489753592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30942754475111,0,0,0,0,0,1.52581736317083,0.884634079449797,1.77328571372128,0,0.435753854075961,23.562612783084,0.384751292518985,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0,15.6441106187842,0,0,0,0,0,0,0,0,54.2096279618629,19.026588850306,18.7239094899076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,5.42999601753713,0.864221491201268,25.1472267284245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,1.90691047733584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.5889158038764,0,0,0.207216164163037,5.63370974410035,2.07377898544228,0.430227358820278,2.721636016803,2.8120423570522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0,0,0,0,0.435433495793923,0,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,5.69654649642034,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,6.9216104775583,9.64039551239516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28820270022815,1.11670113798954,0,0,0,0,0,0,0,0,1.54608682530637,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,185.859982862595,159.481116813884,153.524026035778,200.073266536563,165.806256954321,152.090466850213,253.752521957429,227.420678080276,195.06680857182,0,0,0,0,0,0,0,0,0,0,10.0970262575936,0,5.62962245505133,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,10.3107217385455,4.36753533317035,8.79005602902796,0.53735113621709,1.45316969256981,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,4.41114234667227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76251414593493,13.6512651667669,1.6068392984416,0,0,0,0,0,0,0,0,0.991709492165869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0,3.44404298136984,6.73885902670502,3.99087138183008,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20735660317994,0,2.15012491469462,0,0,0,0,25.3350489753592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30942754475111,0,0,0,0,0,1.52581736317083,0.884634079449797,1.77328571372128,0,0.435753854075961,23.562612783084,0.384751292518985,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0,15.6441106187842,0,0,0,0,0,0,0,0,54.2096279618629,19.026588850306,18.7239094899076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,5.42999601753713,0.864221491201268,25.1472267284245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,1.90691047733584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.5889158038764,0,0,0.207216164163037,5.63370974410035,2.07377898544228,0.430227358820278,2.721636016803,2.8120423570522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0,0,0,0,0.435433495793923,0,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,5.69654649642034,0,0.201273793591026,0 | ||
|short_description=p1@SPINK6 | |short_description=p1@SPINK6 | ||
}} | }} |
Latest revision as of 23:42, 15 September 2015
Short description: | p1@SPINK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPINK6_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 183bp_to_ENST00000325630, uc003lpa.2_5end |
EntrezGene: | SPINK6 |
HGNC: | 29486 |
UniProt: | Q6UWN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.57e-21 | 14 |
protein secreting cell | 5.15e-16 | 6 |
transitional epithelial cell | 2.20e-15 | 4 |
urothelial cell | 2.20e-15 | 4 |
acinar cell | 7.95e-13 | 5 |
epithelial cell of Malassez | 1.47e-12 | 3 |
sebum secreting cell | 4.08e-09 | 2 |
epithelial cell of sweat gland | 4.08e-09 | 2 |
epithelial cell of skin gland | 4.08e-09 | 2 |
acinar cell of sebaceous gland | 4.08e-09 | 2 |
corneal epithelial cell | 5.40e-09 | 2 |
epithelial cell | 1.53e-08 | 253 |
ecto-epithelial cell | 6.86e-08 | 34 |
epidermal cell | 2.73e-07 | 9 |
glandular epithelial cell | 3.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.87e-37 | 9 |
upper respiratory tract | 1.06e-16 | 19 |
urothelium | 2.47e-12 | 5 |
transitional epithelium | 2.70e-10 | 6 |
jaw skeleton | 1.57e-09 | 4 |
splanchnocranium | 1.57e-09 | 4 |
respiratory primordium | 3.74e-09 | 38 |
endoderm of foregut | 3.74e-09 | 38 |
skin gland | 4.08e-09 | 2 |
epidermis gland | 4.08e-09 | 2 |
gland of integumental system | 4.08e-09 | 2 |
sebaceous gland | 4.08e-09 | 2 |
skin sebaceous gland | 4.08e-09 | 2 |
sweat gland | 4.08e-09 | 2 |
sweat gland placode | 4.08e-09 | 2 |
sebaceous gland placode | 4.08e-09 | 2 |
primary subdivision of cranial skeletal system | 1.05e-07 | 5 |
segment of respiratory tract | 5.07e-07 | 47 |