FFCP PHASE1:Hg19::chr16:56648492..56648498,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56648492..56648498,- | |||
|coexpression_cluster_id=C429 | |coexpression_cluster_id=C429 | ||
|description=CAGE_peak_at_chr16:56648492..56648498,- | |description=CAGE_peak_at_chr16:56648492..56648498,- | ||
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|ontology_enrichment_celltype=CL:0000064!1.14e-08!3;CL:0005012!1.14e-08!3;CL:0000067!1.14e-08!3;CL:0002304!1.14e-08!3;CL:0000306!4.90e-07!4;CL:0002222!4.90e-07!4;CL:0002224!4.90e-07!4 | |ontology_enrichment_celltype=CL:0000064!1.14e-08!3;CL:0005012!1.14e-08!3;CL:0000067!1.14e-08!3;CL:0002304!1.14e-08!3;CL:0000306!4.90e-07!4;CL:0002222!4.90e-07!4;CL:0002224!4.90e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0002544;1.44e-09;6!CL:1000413;8.37e-07;9 | |ontology_enrichment_celltype_v019=CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4!CL:0002544;1.44e-09;6!CL:1000413;8.37e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.00e-13,4;CL:0002222,1.00e-13,4;CL:0002224,1.00e-13,4;CL:0002544,1.44e-09,6;CL:1000413,8.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.66e-11;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.66e-11;5 | ||
|ontology_enrichment_disease=DOID:6193!1.54e-07!1;DOID:0060085!4.34e-07!1;DOID:3165!4.34e-07!1;DOID:0060121!4.34e-07!1;DOID:2438!4.34e-07!1;DOID:4418!4.34e-07!1 | |ontology_enrichment_disease=DOID:6193!1.54e-07!1;DOID:0060085!4.34e-07!1;DOID:3165!4.34e-07!1;DOID:0060121!4.34e-07!1;DOID:2438!4.34e-07!1;DOID:4418!4.34e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001801!1.71e-10!14;UBERON:0007625!7.76e-09!11;UBERON:0001778!1.14e-08!3;UBERON:0001775!1.14e-08!3;UBERON:0000019!1.15e-07!19;UBERON:0000047!1.15e-07!19;UBERON:0004088!1.15e-07!19;UBERON:0003072!1.15e-07!19;UBERON:0003071!1.15e-07!19;UBERON:0004128!1.15e-07!19;UBERON:0000970!2.86e-07!20;UBERON:0010077!4.90e-07!4;UBERON:0005389!4.90e-07!4;UBERON:0000484!4.90e-07!4;UBERON:0002546!4.90e-07!4;UBERON:0000965!4.90e-07!4;UBERON:0001803!4.90e-07!4;UBERON:0003073!4.90e-07!4;UBERON:0005426!4.90e-07!4;UBERON:0002104!6.52e-07!21;UBERON:0001456!6.52e-07!21 | |ontology_enrichment_uberon=UBERON:0001801!1.71e-10!14;UBERON:0007625!7.76e-09!11;UBERON:0001778!1.14e-08!3;UBERON:0001775!1.14e-08!3;UBERON:0000019!1.15e-07!19;UBERON:0000047!1.15e-07!19;UBERON:0004088!1.15e-07!19;UBERON:0003072!1.15e-07!19;UBERON:0003071!1.15e-07!19;UBERON:0004128!1.15e-07!19;UBERON:0000970!2.86e-07!20;UBERON:0010077!4.90e-07!4;UBERON:0005389!4.90e-07!4;UBERON:0000484!4.90e-07!4;UBERON:0002546!4.90e-07!4;UBERON:0000965!4.90e-07!4;UBERON:0001803!4.90e-07!4;UBERON:0003073!4.90e-07!4;UBERON:0005426!4.90e-07!4;UBERON:0002104!6.52e-07!21;UBERON:0001456!6.52e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0002046;2.66e-11;5!UBERON:0003915;8.37e-07;9!UBERON:0004700;8.37e-07;9!UBERON:0001917;8.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4!UBERON:0002046;2.66e-11;5!UBERON:0003915;8.37e-07;9!UBERON:0004700;8.37e-07;9!UBERON:0001917;8.37e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.00e-13,4;UBERON:0005389,1.00e-13,4;UBERON:0000484,1.00e-13,4;UBERON:0002546,1.00e-13,4;UBERON:0000965,1.00e-13,4;UBERON:0001803,1.00e-13,4;UBERON:0003073,1.00e-13,4;UBERON:0005426,1.00e-13,4;UBERON:0002046,2.66e-11,5;UBERON:0004117,2.66e-11,5;UBERON:0007689,2.66e-11,5;UBERON:0007123,2.66e-11,5;UBERON:0003091,2.66e-11,5;UBERON:0000076,1.59e-07,8;UBERON:0003915,8.37e-07,9;UBERON:0004700,8.37e-07,9;UBERON:0001917,8.37e-07,9 | |||
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|short_description=p@chr16:56648492..56648498,- | |short_description=p@chr16:56648492..56648498,- | ||
}} | }} |
Latest revision as of 10:18, 25 July 2015
Short description: | p@chr16:56648492..56648498, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56648492..56648498, - |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.00e-13 | 4 |
vertebrate lens cell | 1.00e-13 | 4 |
lens epithelial cell | 1.00e-13 | 4 |
aortic endothelial cell | 1.44e-09 | 6 |
endothelial cell of artery | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.00e-13 | 4 |
transparent eye structure | 1.00e-13 | 4 |
simple cuboidal epithelium | 1.00e-13 | 4 |
cranial placode | 1.00e-13 | 4 |
lens of camera-type eye | 1.00e-13 | 4 |
epithelium of lens | 1.00e-13 | 4 |
lens placode | 1.00e-13 | 4 |
lens vesicle | 1.00e-13 | 4 |
thyroid gland | 2.66e-11 | 5 |
pharyngeal pouch | 2.66e-11 | 5 |
thyroid diverticulum | 2.66e-11 | 5 |
pharyngeal pouch 2 | 2.66e-11 | 5 |
thyroid primordium | 2.66e-11 | 5 |
external ectoderm | 1.59e-07 | 8 |
endothelial tube | 8.37e-07 | 9 |
arterial system endothelium | 8.37e-07 | 9 |
endothelium of artery | 8.37e-07 | 9 |