FFCP PHASE1:Hg19::chr6:11112032..11112041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=405754 | |EntrezGene=405754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33823 | |HGNC=33823 | ||
|TSSclassifier=strong | |||
|UniProt=P60508 | |UniProt=P60508 | ||
|association_with_transcript=29bp_to_NM_207582_5end | |association_with_transcript=29bp_to_NM_207582_5end | ||
|cluster_id=chr6:11112032..11112041,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_5_at_ERVFRD-1_5end | |description=CAGE_peak_5_at_ERVFRD-1_5end | ||
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|ontology_enrichment_celltype=CL:0002274!8.27e-49!5;CL:0000457!8.27e-49!5;CL:0002191!8.27e-49!5;CL:0000097!8.27e-49!5;CL:0000831!8.27e-49!5;CL:0002028!8.27e-49!5;CL:0000163!9.07e-39!9;CL:0000151!1.12e-09!35 | |ontology_enrichment_celltype=CL:0002274!8.27e-49!5;CL:0000457!8.27e-49!5;CL:0002191!8.27e-49!5;CL:0000097!8.27e-49!5;CL:0000831!8.27e-49!5;CL:0002028!8.27e-49!5;CL:0000163!9.07e-39!9;CL:0000151!1.12e-09!35 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.01e-125;5!CL:0000163;4.60e-109;9!CL:0000151;1.16e-26;36!CL:0002097;4.21e-21;2!CL:0000174;1.50e-14;3!CL:0000766;1.95e-08;69 | |ontology_enrichment_celltype_v019=CL:0000097;2.01e-125;5!CL:0000163;4.60e-109;9!CL:0000151;1.16e-26;36!CL:0002097;4.21e-21;2!CL:0000174;1.50e-14;3!CL:0000766;1.95e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.71e-125,5;CL:0002028,1.71e-125,5;CL:0000163,4.60e-109,9;CL:0000151,5.37e-28,36;CL:0002097,4.66e-21,2;CL:0000174,1.60e-14,3;CL:0000839,3.87e-10,66;CL:0000557,5.34e-10,67;CL:0000766,2.34e-09,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:170;6.13e-08;6 | |ontology_enrichment_disease_v019=DOID:170;6.13e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:170,6.34e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.50e-14;3!UBERON:0001235;1.50e-14;3!UBERON:0006858;1.50e-14;3 | |ontology_enrichment_uberon_v019=UBERON:0002369;1.50e-14;3!UBERON:0001235;1.50e-14;3!UBERON:0006858;1.50e-14;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.60e-14,3;UBERON:0001235,1.60e-14,3;UBERON:0006858,1.60e-14,3;UBERON:0002371,6.64e-09,76;UBERON:0001474,2.64e-08,82;UBERON:0004765,1.26e-07,90;UBERON:0002405,2.12e-07,93;UBERON:0002390,4.69e-07,98;UBERON:0003061,4.69e-07,98;UBERON:0001434,6.30e-07,100 | |||
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|short_description=p5@ERVFRD-1 | |short_description=p5@ERVFRD-1 | ||
}} | }} |
Latest revision as of 19:56, 19 September 2015
Short description: | p5@ERVFRD-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ERVFRD-1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 29bp_to_NM_207582_5end |
EntrezGene: | ERVFRD-1 |
HGNC: | 33823 |
UniProt: | P60508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.71e-125 | 5 |
basophil mast progenitor cell | 1.71e-125 | 5 |
endocrine cell | 4.60e-109 | 9 |
secretory cell | 5.37e-28 | 36 |
cortical cell of adrenal gland | 4.66e-21 | 2 |
steroid hormone secreting cell | 1.60e-14 | 3 |
myeloid lineage restricted progenitor cell | 3.87e-10 | 66 |
granulocyte monocyte progenitor cell | 5.34e-10 | 67 |
myeloid leukocyte | 2.34e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.60e-14 | 3 |
adrenal cortex | 1.60e-14 | 3 |
adrenal/interrenal gland | 1.60e-14 | 3 |
bone marrow | 6.64e-09 | 76 |
bone element | 2.64e-08 | 82 |
skeletal element | 1.26e-07 | 90 |
immune system | 2.12e-07 | 93 |
hematopoietic system | 4.69e-07 | 98 |
blood island | 4.69e-07 | 98 |
skeletal system | 6.30e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 6.34e-08 | 6 |