FFCP PHASE1:Hg19::chr20:60725725..60725730,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:60725725..60725730,+
|short_description=p@chr20:60725725..60725730,+
|description=CAGE_peak_at_chr20:60725725..60725730,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:60725725..60725730,+ | |||
|coexpression_cluster_id=C1042 | |||
|description=CAGE_peak_at_chr20:60725725..60725730,+ | |||
|id=chr20:60725725..60725730,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.69e-22;6!CL:0002397;1.69e-22;6!CL:0000767;5.56e-12;3!CL:0000094;4.64e-10;8!CL:0000097;7.20e-08;5!CL:0000081;1.91e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.76e-23,9;CL:0002397,3.76e-23,9;CL:0000767,6.23e-12,3;CL:0000738,3.78e-11,136;CL:0000094,4.94e-10,8;CL:0000766,5.85e-10,72;CL:0000037,1.56e-08,168;CL:0000988,5.76e-08,177;CL:0000097,7.71e-08,5;CL:0002028,7.71e-08,5;CL:0002032,1.02e-07,161;CL:0000837,1.02e-07,161;CL:0000081,2.00e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.56e-12;3!UBERON:0005425;1.30e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.30e-09;1!UBERON:0001785;1.30e-09;1!UBERON:0002464;1.30e-09;1!UBERON:0004904;1.30e-09;1!UBERON:0001021;1.30e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.15e-09,1;UBERON:0001785,1.15e-09,1;UBERON:0002464,1.15e-09,1;UBERON:0004904,1.15e-09,1;UBERON:0001021,1.15e-09,1;UBERON:0003902,1.15e-09,1;UBERON:0005425,1.15e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0.393364276848904,1.15148819429164,1.54816123316076,0,0,0,0,0.284338464974843,0.293600439334847,2.21598163412751,1.00272223735071,1.73608696572681,0.223915474239924,0,0,0.581592955118259,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,1.25795187305026,0.898629049171961,0.600707571366025,0.803627933485401,1.71007646244749,0.79566670879636,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0.263384084775077,0.393419540227666,1.57204305099666,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0,0.829050053357545,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0.604820229674197,2.13952156626806,1.30341963494519,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,11.6334079244498,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0.37223371266318,0.506328996723799,0.0974370051611986,0,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.614942192715568,0.171567810298526,0,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.264145302039678,2.07328115540772,2.16179930125442,0.37872730027914,0.380987365753014,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.336255431980582,0.788123040807709,0.646882724578552,1.66845947163673,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.431428401637234,1.28073069364133,0,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0.657779629937804,0.522870902049801,0,0,0.325378394664303,0.103041011647722,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0.851692475380653,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0.284136146806413,0.47748896947538,0.890894042497916,0,0,0.562677665642051,0.333926115068718,0.329607748453519,0.844501632511974,0.19924798825107,0,0.251932747854276,0.20453736500431,0.492339221844278,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.7812832832557,0.437299999980979,0,0.455173793141999,0,0.709163045303809,0,0,0.347249989866585,0,0.361789315876224,1.52581736317083,1.21637185924347,0.591095237907095,0,0,0.41827123283581,0.0769502585037971,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0.317873157960757,0,0.489698424477443,0.565412285735763,0,0,0.176915129006678,0,0.296521128680622,0,0.104421949505455,0.202203398942031,0,0,0.547364367646998,0,0.485560759068186,0.789168805698781,1.20990716048664,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0.870592065804026,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.0969890164884194,0.264768380074501,0,0.137041924646751,0.19871461170299,0.126621591911757,0.195551382734803,0.160317640503067,0.426905989478705,0,0,0.229073192331831,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0.866851769704557,0,0.410716136675979,0,0,0,0.558564802544508,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0.945398187686684,0.906574442192831,1.14586024552114,0,0.169346664131569,0,0.544813624446302,0.803765742325096,0,0,0,0.77380195455795,0.12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| ||
|short_description=p@chr20:60725725..60725730,+ | |||
}} | }} |
Latest revision as of 16:06, 28 July 2015
Short description: | p@chr20:60725725..60725730, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:60725725..60725730, + |
Coexpression cluster: | C1042_Eosinophils_CD8_CD4_Natural_CD14_thymus_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.76e-23 | 9 |
CD14-positive, CD16-positive monocyte | 3.76e-23 | 9 |
basophil | 6.23e-12 | 3 |
leukocyte | 3.78e-11 | 136 |
granulocyte | 4.94e-10 | 8 |
myeloid leukocyte | 5.85e-10 | 72 |
hematopoietic stem cell | 1.56e-08 | 168 |
hematopoietic cell | 5.76e-08 | 177 |
mast cell | 7.71e-08 | 5 |
basophil mast progenitor cell | 7.71e-08 | 5 |
hematopoietic oligopotent progenitor cell | 1.02e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-07 | 161 |
blood cell | 2.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.15e-09 | 1 |
cranial nerve | 1.15e-09 | 1 |
nerve trunk | 1.15e-09 | 1 |
nerve connecting eye with brain | 1.15e-09 | 1 |
nerve | 1.15e-09 | 1 |
retinal neural layer | 1.15e-09 | 1 |
presumptive neural retina | 1.15e-09 | 1 |