FFCP PHASE1:Hg19::chr10:51555715..51555724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4477 | |EntrezGene=4477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7372 | |HGNC=7372 | ||
|TSSclassifier=strong | |||
|UniProt=P08118 | |UniProt=P08118 | ||
|association_with_transcript=-5bp_to_BT006816,CR457015,CU675069,DQ892498,DQ895711_5end | |association_with_transcript=-5bp_to_BT006816,CR457015,CU675069,DQ892498,DQ895711_5end | ||
|cluster_id=chr10:51555715..51555724,+ | |||
|description=CAGE_peak_2_at_MSMB_5end | |description=CAGE_peak_2_at_MSMB_5end | ||
|id=chr10:51555715..51555724,+ | |id=chr10:51555715..51555724,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.48e-40;1 | |ontology_enrichment_development_v019=UBERON:0008801;1.48e-40;1 | ||
|ontology_enrichment_disease=DOID:5093!9.13e-12!4;DOID:1612!9.13e-12!4 | |ontology_enrichment_disease=DOID:5093!9.13e-12!4;DOID:1612!9.13e-12!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4 | |ontology_enrichment_disease_v019=DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.48e-40;1!UBERON:0001567;1.48e-40;1!UBERON:0001044;3.32e-27;6!UBERON:0003293;3.32e-27;6!UBERON:0003294;3.32e-27;6!UBERON:0010047;3.32e-27;6!UBERON:0003408;3.32e-27;6!UBERON:0000167;3.32e-27;6!UBERON:0001829;4.66e-21;2!UBERON:0004089;4.66e-21;2!UBERON:0003127;6.30e-21;2!UBERON:0001041;2.59e-12;14!UBERON:0000161;2.41e-09;19!UBERON:0000166;2.41e-09;19!UBERON:0003126;6.21e-07;7!UBERON:0001005;6.21e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001831;1.48e-40;1!UBERON:0001567;1.48e-40;1!UBERON:0001044;3.32e-27;6!UBERON:0003293;3.32e-27;6!UBERON:0003294;3.32e-27;6!UBERON:0010047;3.32e-27;6!UBERON:0003408;3.32e-27;6!UBERON:0000167;3.32e-27;6!UBERON:0001829;4.66e-21;2!UBERON:0004089;4.66e-21;2!UBERON:0003127;6.30e-21;2!UBERON:0001041;2.59e-12;14!UBERON:0000161;2.41e-09;19!UBERON:0000166;2.41e-09;19!UBERON:0003126;6.21e-07;7!UBERON:0001005;6.21e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.48e-40,1;UBERON:0001567,1.48e-40,1;UBERON:0008801,1.48e-40,1;UBERON:0001044,3.11e-27,6;UBERON:0003293,3.11e-27,6;UBERON:0003294,3.11e-27,6;UBERON:0010047,3.11e-27,6;UBERON:0000167,3.11e-27,6;UBERON:0001829,4.66e-21,2;UBERON:0004089,4.66e-21,2;UBERON:0003127,6.96e-21,2;UBERON:0003408,8.13e-17,10;UBERON:0000166,3.27e-08,22;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
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|short_description=p2@MSMB | |short_description=p2@MSMB | ||
}} | }} |
Latest revision as of 10:32, 18 September 2015
Short description: | p2@MSMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSMB_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_BT006816, CR457015, CU675069, DQ892498, DQ895711_5end |
EntrezGene: | MSMB |
HGNC: | 7372 |
UniProt: | P08118 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.48e-40 | 1 |
cheek | 1.48e-40 | 1 |
parotid gland primordium | 1.48e-40 | 1 |
saliva-secreting gland | 3.11e-27 | 6 |
gland of oral region | 3.11e-27 | 6 |
gland of foregut | 3.11e-27 | 6 |
oral gland | 3.11e-27 | 6 |
oral cavity | 3.11e-27 | 6 |
major salivary gland | 4.66e-21 | 2 |
midface | 4.66e-21 | 2 |
open tracheal system trachea | 6.96e-21 | 2 |
gland of gut | 8.13e-17 | 10 |
oral opening | 3.27e-08 | 22 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |