FFCP PHASE1:Hg19::chr1:110678228..110678236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:110678228..110678236,+ | |||
|coexpression_cluster_id=C184 | |coexpression_cluster_id=C184 | ||
|description=CAGE_peak_at_chr1:110678228..110678236,+ | |description=CAGE_peak_at_chr1:110678228..110678236,+ | ||
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|ontology_enrichment_celltype=CL:0000167!6.62e-41!1;CL:0000164!6.62e-41!1;CL:0000502!6.62e-41!1;CL:0000172!6.62e-41!1;CL:0000173!6.62e-41!1;CL:0002351!6.62e-41!1 | |ontology_enrichment_celltype=CL:0000167!6.62e-41!1;CL:0000164!6.62e-41!1;CL:0000502!6.62e-41!1;CL:0000172!6.62e-41!1;CL:0000173!6.62e-41!1;CL:0002351!6.62e-41!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.23e-66;1!CL:0000164;1.23e-66;1!CL:0000502;1.23e-66;1!CL:0000172;1.23e-66;1!CL:0000173;1.23e-66;1!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9 | |ontology_enrichment_celltype_v019=CL:0000167;1.23e-66;1!CL:0000164;1.23e-66;1!CL:0000502;1.23e-66;1!CL:0000172;1.23e-66;1!CL:0000173;1.23e-66;1!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.23e-66,1;CL:0000164,1.23e-66,1;CL:0000502,1.23e-66,1;CL:0000172,1.23e-66,1;CL:0000173,1.23e-66,1;CL:0002351,1.23e-66,1;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002351;1.23e-66;1 | |ontology_enrichment_development_v019=CL:0002351;1.23e-66;1 | ||
|ontology_enrichment_disease=DOID:4430!6.62e-41!1;DOID:3119!4.46e-26!14;DOID:5409!3.10e-11!4;DOID:169!5.54e-08!6;DOID:0050687!1.55e-07!143;DOID:1325!5.70e-07!7;DOID:3904!5.70e-07!7 | |ontology_enrichment_disease=DOID:4430!6.62e-41!1;DOID:3119!4.46e-26!14;DOID:5409!3.10e-11!4;DOID:169!5.54e-08!6;DOID:0050687!1.55e-07!143;DOID:1325!5.70e-07!7;DOID:3904!5.70e-07!7 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.23e-66;1!DOID:5409;1.03e-17;4!DOID:169;2.19e-12;6!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9!DOID:171;5.73e-08;10 | |ontology_enrichment_disease_v019=DOID:4430;1.23e-66;1!DOID:5409;1.03e-17;4!DOID:169;2.19e-12;6!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9!DOID:171;5.73e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,1.23e-66,1;DOID:5409,1.03e-17,4;DOID:169,2.19e-12,6;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr1:110678228..110678236,+ | |short_description=p@chr1:110678228..110678236,+ | ||
}} | }} |
Latest revision as of 19:30, 27 July 2015
Short description: | p@chr1:110678228..110678236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110678228..110678236, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.23e-66 | 1 |
enteroendocrine cell | 1.23e-66 | 1 |
type D enteroendocrine cell | 1.23e-66 | 1 |
somatostatin secreting cell | 1.23e-66 | 1 |
pancreatic D cell | 1.23e-66 | 1 |
progenitor cell of endocrine pancreas | 1.23e-66 | 1 |
glandular epithelial cell | 1.04e-08 | 9 |
endocrine cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.23e-66 | 1 |
lung small cell carcinoma | 1.03e-17 | 4 |
neuroendocrine tumor | 2.19e-12 | 6 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
neuroectodermal tumor | 5.73e-08 | 10 |