FFCP PHASE1:Hg19::chr20:57594454..57594491,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:57594454..57594491,+
|short_description=p1@TUBB1
|description=CAGE_peak_1_at_TUBB1_5end
|association_with_transcript=145bp_to_ENST00000217133,NM_030773,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81027 | |EntrezGene=81027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16257 | |HGNC=16257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4B7 | |UniProt=Q9H4B7 | ||
|association_with_transcript=145bp_to_ENST00000217133,NM_030773,uc002yak.2_5end | |||
|cluster_id=chr20:57594454..57594491,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_TUBB1_5end | |||
|id=chr20:57594454..57594491,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.69e-27!172;CL:0000566!1.69e-27!172;CL:0000988!1.78e-24!182;CL:0002032!1.35e-23!165;CL:0000837!1.35e-23!165;CL:0000738!5.78e-22!140;CL:0002087!3.12e-18!119;CL:0000763!4.40e-18!112;CL:0000049!4.40e-18!112;CL:0002057!5.24e-17!42;CL:0002031!9.13e-16!124;CL:0000766!1.12e-15!76;CL:0000860!3.29e-15!45;CL:0002194!2.28e-11!63;CL:0000576!2.28e-11!63;CL:0000040!2.28e-11!63;CL:0000559!2.28e-11!63;CL:0000839!3.47e-11!70;CL:0000094!3.65e-11!8;CL:0002009!1.02e-10!65;CL:0000557!5.19e-09!71;CL:0000081!1.80e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;9.17e-21;8!CL:0000081;1.20e-14;11!CL:0000860;9.13e-11;33!CL:0002057;9.13e-11;33!CL:0000576;1.93e-09;48!CL:0000775;5.36e-09;3!CL:0000226;6.02e-09;3!CL:0000842;6.02e-09;3!CL:0000767;1.06e-08;3!CL:0000763;1.50e-08;100!CL:0000236;4.50e-08;13!CL:0000473;4.24e-07;39!CL:0000234;4.24e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.91e-26,168;CL:0000988,8.84e-24,177;CL:0000763,1.49e-23,108;CL:0000049,1.49e-23,108;CL:0002032,3.16e-23,161;CL:0000837,3.16e-23,161;CL:0000094,8.77e-21,8;CL:0000738,2.15e-17,136;CL:0000766,1.55e-16,72;CL:0000081,1.16e-14,11;CL:0002087,4.40e-12,115;CL:0000860,2.19e-11,42;CL:0002057,2.19e-11,42;CL:0002031,3.04e-10,120;CL:0000839,9.53e-10,66;CL:0000473,1.82e-09,48;CL:0000234,1.82e-09,48;CL:0000775,5.37e-09,3;CL:0000226,5.96e-09,3;CL:0000842,5.96e-09,3;CL:0002194,7.44e-09,59;CL:0000576,7.44e-09,59;CL:0000040,7.44e-09,59;CL:0000559,7.44e-09,59;CL:0000767,1.03e-08,3;CL:0002009,1.98e-08,61;CL:0000236,1.35e-07,14;CL:0000557,2.59e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.74e-08;7!CL:0002057;3.38e-08;42!CL:0000049;8.20e-08;108 | |||
|ontology_enrichment_disease=DOID:1036!1.25e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.82e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.76e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-24!115;UBERON:0002390!1.67e-15!102;UBERON:0003061!1.67e-15!102;UBERON:0002193!2.09e-13!112;UBERON:0000178!1.80e-12!15;UBERON:0000179!1.80e-12!15;UBERON:0000463!1.80e-12!15;UBERON:0002371!1.21e-07!80;UBERON:0001474!5.83e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.38e-25;15!UBERON:0000179;7.38e-25;15!UBERON:0000463;7.38e-25;15!UBERON:0002390;3.65e-13;32!UBERON:0002193;6.58e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.36e-25,15;UBERON:0000179,7.36e-25,15;UBERON:0000463,7.36e-25,15;UBERON:0002390,3.03e-18,98;UBERON:0003061,3.03e-18,98;UBERON:0002193,9.40e-16,108 | |||
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| ||
|short_description=p1@TUBB1 | |||
}} | }} |
Latest revision as of 07:18, 17 September 2015
Short description: | p1@TUBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TUBB1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 145bp_to_ENST00000217133, NM_030773, uc002yak.2_5end |
EntrezGene: | TUBB1 |
HGNC: | 16257 |
UniProt: | Q9H4B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.91e-26 | 168 |
hematopoietic cell | 8.84e-24 | 177 |
myeloid cell | 1.49e-23 | 108 |
common myeloid progenitor | 1.49e-23 | 108 |
hematopoietic oligopotent progenitor cell | 3.16e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.16e-23 | 161 |
granulocyte | 8.77e-21 | 8 |
leukocyte | 2.15e-17 | 136 |
myeloid leukocyte | 1.55e-16 | 72 |
blood cell | 1.16e-14 | 11 |
nongranular leukocyte | 4.40e-12 | 115 |
classical monocyte | 2.19e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-11 | 42 |
hematopoietic lineage restricted progenitor cell | 3.04e-10 | 120 |
myeloid lineage restricted progenitor cell | 9.53e-10 | 66 |
defensive cell | 1.82e-09 | 48 |
phagocyte | 1.82e-09 | 48 |
neutrophil | 5.37e-09 | 3 |
single nucleate cell | 5.96e-09 | 3 |
mononuclear cell | 5.96e-09 | 3 |
monopoietic cell | 7.44e-09 | 59 |
monocyte | 7.44e-09 | 59 |
monoblast | 7.44e-09 | 59 |
promonocyte | 7.44e-09 | 59 |
basophil | 1.03e-08 | 3 |
macrophage dendritic cell progenitor | 1.98e-08 | 61 |
B cell | 1.35e-07 | 14 |
granulocyte monocyte progenitor cell | 2.59e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
blood | 7.36e-25 | 15 |
haemolymphatic fluid | 7.36e-25 | 15 |
organism substance | 7.36e-25 | 15 |
hematopoietic system | 3.03e-18 | 98 |
blood island | 3.03e-18 | 98 |
hemolymphoid system | 9.40e-16 | 108 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.76e-11 | 8 |