FFCP PHASE1:Hg19::chr8:144679833..144679857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1936 | |EntrezGene=1936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3211 | |HGNC=3211 | ||
|TSSclassifier=strong | |||
|UniProt=P29692,B2RAR6,D3DWK1,Q4VBZ6,B4DDU4,E9PBQ9 | |UniProt=P29692,B2RAR6,D3DWK1,Q4VBZ6,B4DDU4,E9PBQ9 | ||
|association_with_transcript=0bp_to_ENST00000395119,ENST00000419152,ENST00000423316,NM_001130053,NM_001130055,NM_001130056,NM_001195203,NM_001960,NM_032378,uc003yyr.2,uc003yys.2,uc003yyt.2,uc003yyu.2,uc003yyv.2,uc011lkj.1,uc011lkk.1,uc011lkl.1_5end | |association_with_transcript=0bp_to_ENST00000395119,ENST00000419152,ENST00000423316,NM_001130053,NM_001130055,NM_001130056,NM_001195203,NM_001960,NM_032378,uc003yyr.2,uc003yys.2,uc003yyt.2,uc003yyu.2,uc003yyv.2,uc011lkj.1,uc011lkk.1,uc011lkl.1_5end | ||
|cluster_id=chr8:144679833..144679857,- | |||
|description=CAGE_peak_5_at_EEF1D_5end | |description=CAGE_peak_5_at_EEF1D_5end | ||
|id=chr8:144679833..144679857,- | |id=chr8:144679833..144679857,- | ||
|ontology_enrichment_celltype=CL:0002321!6.73e-16!248;CL:0000220!1.44e-15!246;CL:0000012!4.85e-15!682;CL:0000548!4.86e-15!679;CL:0000004!4.86e-15!679;CL:0000255!4.86e-15!679;CL:0000066!1.65e-12!254;CL:0000055!1.16e-11!180;CL:0000144!1.05e-10!625;CL:0000003!3.07e-09!722;CL:0000222!2.36e-07!119;CL:0002371!2.74e-07!591;CL:0000192!3.37e-07!42;CL:0000514!3.37e-07!42 | |ontology_enrichment_celltype=CL:0002321!6.73e-16!248;CL:0000220!1.44e-15!246;CL:0000012!4.85e-15!682;CL:0000548!4.86e-15!679;CL:0000004!4.86e-15!679;CL:0000255!4.86e-15!679;CL:0000066!1.65e-12!254;CL:0000055!1.16e-11!180;CL:0000144!1.05e-10!625;CL:0000003!3.07e-09!722;CL:0000222!2.36e-07!119;CL:0002371!2.74e-07!591;CL:0000192!3.37e-07!42;CL:0000514!3.37e-07!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.21e-13,250;CL:0000066,2.79e-11,253;CL:0000192,4.22e-07,43;CL:0000514,4.22e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.63e-09!238;UBERON:0009142!4.63e-09!238;UBERON:0005256!1.59e-08!143;UBERON:0000486!3.04e-08!82;UBERON:0002100!7.47e-08!216;UBERON:0004290!1.08e-07!70;UBERON:0001048!1.44e-07!168;UBERON:0003914!2.69e-07!118;UBERON:0000914!3.54e-07!83;UBERON:0002329!3.54e-07!83;UBERON:0003077!3.54e-07!83;UBERON:0003059!3.54e-07!83;UBERON:0007282!3.54e-07!83;UBERON:0009618!3.54e-07!83;UBERON:0007285!3.54e-07!83;UBERON:0001737!8.10e-07!9 | |ontology_enrichment_uberon=UBERON:0003104!4.63e-09!238;UBERON:0009142!4.63e-09!238;UBERON:0005256!1.59e-08!143;UBERON:0000486!3.04e-08!82;UBERON:0002100!7.47e-08!216;UBERON:0004290!1.08e-07!70;UBERON:0001048!1.44e-07!168;UBERON:0003914!2.69e-07!118;UBERON:0000914!3.54e-07!83;UBERON:0002329!3.54e-07!83;UBERON:0003077!3.54e-07!83;UBERON:0003059!3.54e-07!83;UBERON:0007282!3.54e-07!83;UBERON:0009618!3.54e-07!83;UBERON:0007285!3.54e-07!83;UBERON:0001737!8.10e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.60e-08;9!UBERON:0001557;1.60e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.60e-08;9!UBERON:0001557;1.60e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.62e-08,9;UBERON:0001048,9.48e-08,160;UBERON:0003914,7.48e-07,117 | |||
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| ||
|short_description=p5@EEF1D | |short_description=p5@EEF1D | ||
}} | }} |
Latest revision as of 22:44, 16 September 2015
Short description: | p5@EEF1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EEF1D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395119, ENST00000419152, ENST00000423316, NM_001130053, NM_001130055, NM_001130056, NM_001195203, NM_001960, NM_032378, uc003yyr.2, uc003yys.2, uc003yyt.2, uc003yyu.2, uc003yyv.2, uc011lkj.1, uc011lkk.1, uc011lkl.1_5end |
EntrezGene: | EEF1D |
HGNC: | 3211 |
UniProt: | P29692B2RAR6D3DWK1Q4VBZ6B4DDU4E9PBQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.21e-13 | 250 |
epithelial cell | 2.79e-11 | 253 |
smooth muscle cell | 4.22e-07 | 43 |
smooth muscle myoblast | 4.22e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.62e-08 | 9 |
primordium | 9.48e-08 | 160 |
epithelial tube | 7.48e-07 | 117 |