FFCP PHASE1:Hg19::chr20:56706333..56706346,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:56706333..56706346,-
|short_description=p@chr20:56706333..56706346,-
|description=CAGE_peak_at_chr20:56706333..56706346,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:56706333..56706346,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr20:56706333..56706346,- | |||
|id=chr20:56706333..56706346,- | |||
|ontology_enrichment_celltype=CL:0000133!1.07e-12!59;CL:0000221!4.47e-11!71;CL:0000128!1.09e-10!7;CL:0000126!1.09e-10!7;CL:0000127!1.09e-10!7;CL:0002453!1.09e-10!7;CL:0000333!3.18e-10!41;CL:0002603!6.50e-10!3;CL:0000064!7.10e-10!3;CL:0005012!7.10e-10!3;CL:0000067!7.10e-10!3;CL:0002304!7.10e-10!3;CL:0000147!1.63e-09!14;CL:0000075!4.24e-09!27;CL:0000710!2.22e-08!20;CL:0000243!1.20e-07!15;CL:0000125!1.20e-07!15;CL:0000030!1.20e-07!15;CL:0000339!1.20e-07!15;CL:0000148!2.52e-07!10;CL:0000541!2.52e-07!10;CL:0002319!3.07e-07!25;CL:0000095!9.95e-07!17;CL:0000123!9.95e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.06e-15;1!CL:1000600;2.06e-15;1!CL:0000148;1.98e-13;10!CL:0000147;9.23e-10;14!CL:0000075;1.07e-08;27!CL:0000710;5.45e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.16e-15,1;CL:1000600,1.16e-15,1;CL:0000148,2.25e-13,10;CL:0000541,2.25e-13,10;CL:0000333,1.36e-11,41;CL:0000147,1.01e-09,14;CL:0000075,1.07e-08,27;CL:0000133,4.37e-08,59;CL:0000710,5.80e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.06e-15;1!DOID:1357;2.06e-15;1!DOID:5662;2.06e-15;1!DOID:4929;1.50e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.78e-15,1;DOID:1357,1.78e-15,1;DOID:5662,2.06e-15,1;DOID:4929,1.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.84e-12!4;UBERON:0007625!2.35e-12!11;UBERON:0001778!7.10e-10!3;UBERON:0001775!7.10e-10!3;UBERON:0000153!5.79e-09!129;UBERON:0007811!5.79e-09!129;UBERON:0000033!9.10e-09!123;UBERON:0000019!1.50e-08!19;UBERON:0000047!1.50e-08!19;UBERON:0004088!1.50e-08!19;UBERON:0003072!1.50e-08!19;UBERON:0003071!1.50e-08!19;UBERON:0004128!1.50e-08!19;UBERON:0002203!2.70e-08!6;UBERON:0001768!2.70e-08!6;UBERON:0000475!4.23e-08!365;UBERON:0000970!4.73e-08!20;UBERON:0002104!1.33e-07!21;UBERON:0001456!1.33e-07!21;UBERON:0004121!2.82e-07!169;UBERON:0001801!4.43e-07!14;UBERON:0001444!4.44e-07!48;UBERON:0000924!5.87e-07!173;UBERON:0006601!5.87e-07!173;UBERON:0000020!8.04e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;8.63e-16;1!UBERON:0003703;8.63e-16;1!UBERON:0001174;8.63e-16;1!UBERON:0004914;8.63e-16;1!UBERON:0004645;2.06e-15;1!UBERON:0001764;2.06e-15;1!UBERON:0001825;2.06e-15;1!UBERON:0001256;2.06e-15;1!UBERON:0001259;2.06e-15;1!UBERON:0001255;2.31e-08;2!UBERON:0001556;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.46e-16,1;UBERON:0003703,7.46e-16,1;UBERON:0001174,7.46e-16,1;UBERON:0004914,7.46e-16,1;UBERON:0004645,1.16e-15,1;UBERON:0001256,1.16e-15,1;UBERON:0001259,1.16e-15,1;UBERON:0001764,1.78e-15,1;UBERON:0001825,1.78e-15,1;UBERON:0001255,1.73e-08,2;UBERON:0001556,1.73e-08,2 | |||
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| 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| ||
|short_description=p@chr20:56706333..56706346,- | |||
}} | }} |
Latest revision as of 15:45, 28 July 2015
Short description: | p@chr20:56706333..56706346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:56706333..56706346, - |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.16e-15 | 1 |
lower urinary tract cell | 1.16e-15 | 1 |
melanocyte | 2.25e-13 | 10 |
melanoblast | 2.25e-13 | 10 |
migratory neural crest cell | 1.36e-11 | 41 |
pigment cell | 1.01e-09 | 14 |
columnar/cuboidal epithelial cell | 1.07e-08 | 27 |
neurectodermal cell | 4.37e-08 | 59 |
neurecto-epithelial cell | 5.80e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.46e-16 | 1 |
extrahepatic bile duct | 7.46e-16 | 1 |
common bile duct | 7.46e-16 | 1 |
duodenal papilla | 7.46e-16 | 1 |
urinary bladder urothelium | 1.16e-15 | 1 |
wall of urinary bladder | 1.16e-15 | 1 |
mucosa of urinary bladder | 1.16e-15 | 1 |
maxillary sinus | 1.78e-15 | 1 |
paranasal sinus | 1.78e-15 | 1 |
urinary bladder | 1.73e-08 | 2 |
lower urinary tract | 1.73e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.78e-15 | 1 |
maxillary sinus cancer | 1.78e-15 | 1 |
pleomorphic carcinoma | 2.06e-15 | 1 |
tubular adenocarcinoma | 1.39e-08 | 2 |