FFCP PHASE1:Hg19::chr12:21927609..21927617,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3764 | |EntrezGene=3764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6269 | |HGNC=6269 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000539350_5end | |association_with_transcript=22bp_to_ENST00000539350_5end | ||
|cluster_id=chr12:21927609..21927617,- | |||
|coexpression_cluster_id=C2202 | |coexpression_cluster_id=C2202 | ||
|description=CAGE_peak_9_at_KCNJ8_5end | |description=CAGE_peak_9_at_KCNJ8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.29e-07;2 | |ontology_enrichment_celltype_v019=CL:0002253;4.29e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.93e-13;1!UBERON:0000358;2.78e-13;1!UBERON:0010226;2.78e-13;1!UBERON:0005062;1.56e-12;4!UBERON:0007284;1.56e-12;4!UBERON:0003104;6.01e-09;31 | |ontology_enrichment_development_v019=UBERON:0004140;1.93e-13;1!UBERON:0000358;2.78e-13;1!UBERON:0010226;2.78e-13;1!UBERON:0005062;1.56e-12;4!UBERON:0007284;1.56e-12;4!UBERON:0003104;6.01e-09;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.82e-07;2 | |ontology_enrichment_disease_v019=DOID:114;2.82e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,2.74e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-32!115;UBERON:0003103!4.07e-08!69;UBERON:0003075!4.95e-08!86;UBERON:0007284!4.95e-08!86;UBERON:0004151!9.35e-08!3;UBERON:0003978!1.35e-07!3;UBERON:0009751!1.35e-07!3;UBERON:0000946!1.35e-07!3;UBERON:0002523!1.35e-07!3;UBERON:0005983!1.35e-07!3;UBERON:0002165!1.35e-07!3;UBERON:0002062!1.35e-07!3;UBERON:0007280!1.35e-07!3;UBERON:0002346!2.07e-07!90;UBERON:0001049!5.15e-07!57;UBERON:0005068!5.15e-07!57;UBERON:0006241!5.15e-07!57;UBERON:0007135!5.15e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.95e-32!115;UBERON:0003103!4.07e-08!69;UBERON:0003075!4.95e-08!86;UBERON:0007284!4.95e-08!86;UBERON:0004151!9.35e-08!3;UBERON:0003978!1.35e-07!3;UBERON:0009751!1.35e-07!3;UBERON:0000946!1.35e-07!3;UBERON:0002523!1.35e-07!3;UBERON:0005983!1.35e-07!3;UBERON:0002165!1.35e-07!3;UBERON:0002062!1.35e-07!3;UBERON:0007280!1.35e-07!3;UBERON:0002346!2.07e-07!90;UBERON:0001049!5.15e-07!57;UBERON:0005068!5.15e-07!57;UBERON:0006241!5.15e-07!57;UBERON:0007135!5.15e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.66e-22;25!UBERON:0004151;1.27e-16;3!UBERON:0003978;2.20e-16;3!UBERON:0000946;2.20e-16;3!UBERON:0002426;1.93e-13;1!UBERON:0003831;1.93e-13;1!UBERON:0003898;1.93e-13;1!UBERON:0004830;1.93e-13;1!UBERON:0003830;1.93e-13;1!UBERON:0005175;1.93e-13;1!UBERON:0001774;1.93e-13;1!UBERON:0001103;1.93e-13;1!UBERON:0002084;2.78e-13;1!UBERON:0002082;2.78e-13;1!UBERON:0000948;2.79e-13;22!UBERON:0007029;6.42e-13;1!UBERON:0002146;6.42e-13;1!UBERON:0002134;6.42e-13;1!UBERON:0005208;6.42e-13;1!UBERON:0005623;6.42e-13;1!UBERON:0004145;6.42e-13;1!UBERON:0005946;6.42e-13;1!UBERON:0005965;6.42e-13;1!UBERON:0002078;6.42e-13;1!UBERON:0000922;1.49e-07;49!UBERON:0005090;2.35e-07;2!UBERON:0001630;2.35e-07;2!UBERON:0000341;4.29e-07;2!UBERON:0002081;4.29e-07;2!UBERON:0002133;4.29e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.66e-22;25!UBERON:0004151;1.27e-16;3!UBERON:0003978;2.20e-16;3!UBERON:0000946;2.20e-16;3!UBERON:0002426;1.93e-13;1!UBERON:0003831;1.93e-13;1!UBERON:0003898;1.93e-13;1!UBERON:0004830;1.93e-13;1!UBERON:0003830;1.93e-13;1!UBERON:0005175;1.93e-13;1!UBERON:0001774;1.93e-13;1!UBERON:0001103;1.93e-13;1!UBERON:0002084;2.78e-13;1!UBERON:0002082;2.78e-13;1!UBERON:0000948;2.79e-13;22!UBERON:0007029;6.42e-13;1!UBERON:0002146;6.42e-13;1!UBERON:0002134;6.42e-13;1!UBERON:0005208;6.42e-13;1!UBERON:0005623;6.42e-13;1!UBERON:0004145;6.42e-13;1!UBERON:0005946;6.42e-13;1!UBERON:0005965;6.42e-13;1!UBERON:0002078;6.42e-13;1!UBERON:0000922;1.49e-07;49!UBERON:0005090;2.35e-07;2!UBERON:0001630;2.35e-07;2!UBERON:0000341;4.29e-07;2!UBERON:0002081;4.29e-07;2!UBERON:0002133;4.29e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.49e-21,27;UBERON:0004151,1.08e-16,3;UBERON:0003978,2.38e-16,3;UBERON:0009751,2.38e-16,3;UBERON:0000946,2.38e-16,3;UBERON:0002523,2.38e-16,3;UBERON:0005983,2.38e-16,3;UBERON:0002165,2.38e-16,3;UBERON:0002062,2.38e-16,3;UBERON:0007280,2.38e-16,3;UBERON:0002426,2.06e-13,1;UBERON:0003831,2.06e-13,1;UBERON:0003898,2.06e-13,1;UBERON:0004830,2.06e-13,1;UBERON:0003830,2.06e-13,1;UBERON:0005175,2.06e-13,1;UBERON:0001774,2.06e-13,1;UBERON:0001103,2.06e-13,1;UBERON:0010084,2.06e-13,1;UBERON:0002084,2.32e-13,1;UBERON:0002082,2.32e-13,1;UBERON:0010226,2.32e-13,1;UBERON:0007029,3.76e-13,1;UBERON:0002134,6.06e-13,1;UBERON:0005208,6.06e-13,1;UBERON:0005946,6.06e-13,1;UBERON:0005965,6.06e-13,1;UBERON:0002078,6.06e-13,1;UBERON:0002146,7.68e-13,1;UBERON:0005623,7.68e-13,1;UBERON:0000948,3.31e-12,24;UBERON:0005498,3.31e-12,24;UBERON:0004140,3.31e-12,24;UBERON:0009881,3.31e-12,24;UBERON:0004141,3.31e-12,24;UBERON:0003084,3.31e-12,24;UBERON:0007005,3.31e-12,24;UBERON:0004139,3.31e-12,24;UBERON:0004291,3.31e-12,24;UBERON:0003103,2.73e-10,68;UBERON:0004797,1.57e-07,7;UBERON:0005090,2.43e-07,2;UBERON:0001630,2.43e-07,2;UBERON:0000341,3.48e-07,2;UBERON:0002081,4.17e-07,2;UBERON:0002133,4.17e-07,2;UBERON:0010227,4.17e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.14580212005842,1.43574604915363,0.998395002494955,2.57535628881943,5.80245789348869,3.22480667936286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.367182116944987,0,0,0,0.714695326373367,2.64836788146173,0,0,0.864221491201268,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0.52893040697076,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.12929087541872,0,1.94284397223656,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.213233981900981,1.66645102024618,0.129177819672012,0.496597714366863,0,0.381882949668989,0.404234377916439,0.217716747896961,2.39563310759697,0.0673520530145875,0.358611026963382,0.665320713092027,0,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.14580212005842,1.43574604915363,0.998395002494955,2.57535628881943,5.80245789348869,3.22480667936286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.367182116944987,0,0,0,0.714695326373367,2.64836788146173,0,0,0.864221491201268,0,0,0,0,0,0.732761168390412,1.32506888912221,0,0.52893040697076,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,1.12929087541872,0,1.94284397223656,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0.213233981900981,1.66645102024618,0.129177819672012,0.496597714366863,0,0.381882949668989,0.404234377916439,0.217716747896961,2.39563310759697,0.0673520530145875,0.358611026963382,0.665320713092027,0,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p9@KCNJ8 | |short_description=p9@KCNJ8 | ||
}} | }} |
Latest revision as of 20:03, 17 September 2015
Short description: | p9@KCNJ8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KCNJ8_5end |
Coexpression cluster: | C2202_heart_left_Hepatocyte_diaphragm_liver_pancreas_tongue |
Association with transcript: | 22bp_to_ENST00000539350_5end |
EntrezGene: | KCNJ8 |
HGNC: | 6269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.74e-07 | 2 |