FFCP PHASE1:Hg19::chr1:22150355..22150396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3339 | |EntrezGene=3339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5273 | |HGNC=5273 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=362bp_to_ENST00000481644_5end | |association_with_transcript=362bp_to_ENST00000481644_5end | ||
|cluster_id=chr1:22150355..22150396,- | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_49_at_HSPG2_5end | |description=CAGE_peak_49_at_HSPG2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!5.33e-29!5;CL:0000457!5.33e-29!5;CL:0002191!5.33e-29!5;CL:0000097!5.33e-29!5;CL:0000831!5.33e-29!5;CL:0002028!5.33e-29!5;CL:0000163!3.11e-16!9;CL:0000784!1.26e-12!3;CL:0000763!3.25e-09!112;CL:0000049!3.25e-09!112 | |ontology_enrichment_celltype=CL:0002274!5.33e-29!5;CL:0000457!5.33e-29!5;CL:0002191!5.33e-29!5;CL:0000097!5.33e-29!5;CL:0000831!5.33e-29!5;CL:0002028!5.33e-29!5;CL:0000163!3.11e-16!9;CL:0000784!1.26e-12!3;CL:0000763!3.25e-09!112;CL:0000049!3.25e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.21e-71;5!CL:0000163;4.34e-40;9!CL:0000746;1.40e-14;3!CL:0000151;2.06e-11;36!CL:0000737;2.80e-11;4 | |ontology_enrichment_celltype_v019=CL:0000097;3.21e-71;5!CL:0000163;4.34e-40;9!CL:0000746;1.40e-14;3!CL:0000151;2.06e-11;36!CL:0000737;2.80e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.21e-71,5;CL:0002028,3.21e-71,5;CL:0000163,4.35e-40,9;CL:0000746,1.40e-14,3;CL:0000513,1.40e-14,3;CL:0000737,2.80e-11,4;CL:0000151,1.02e-10,36 | |||
|ontology_enrichment_development_v019=CL:0000513;1.40e-14;3 | |ontology_enrichment_development_v019=CL:0000513;1.40e-14;3 | ||
|ontology_enrichment_disease=DOID:9119!2.16e-10!1;DOID:8552!4.06e-10!1;DOID:225!8.99e-10!1;DOID:8692!1.04e-09!31;DOID:1240!1.28e-07!39 | |ontology_enrichment_disease=DOID:9119!2.16e-10!1;DOID:8552!4.06e-10!1;DOID:225!8.99e-10!1;DOID:8692!1.04e-09!31;DOID:1240!1.28e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:9119;2.21e-40;1 | |ontology_enrichment_disease_v019=DOID:9119;2.21e-40;1 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,2.21e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | |ontology_enrichment_uberon=UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p49@HSPG2 | |short_description=p49@HSPG2 | ||
}} | }} |
Latest revision as of 18:16, 15 September 2015
Short description: | p49@HSPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_HSPG2_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 362bp_to_ENST00000481644_5end |
EntrezGene: | HSPG2 |
HGNC: | 5273 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.21e-71 | 5 |
basophil mast progenitor cell | 3.21e-71 | 5 |
endocrine cell | 4.35e-40 | 9 |
cardiac muscle cell | 1.40e-14 | 3 |
cardiac muscle myoblast | 1.40e-14 | 3 |
striated muscle cell | 2.80e-11 | 4 |
secretory cell | 1.02e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.21e-40 | 1 |