FFCP PHASE1:Hg19::chr20:52612536..52612547,-: Difference between revisions
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|id=chr20:52612536..52612547,-
|short_description=p9@BCAS1
|description=CAGE_peak_9_at_BCAS1_5end
|association_with_transcript=-68bp_to_ENST00000422805_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8537 | |EntrezGene=8537 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=974 | |HGNC=974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000422805_5end | |||
|cluster_id=chr20:52612536..52612547,- | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_9_at_BCAS1_5end | |||
|id=chr20:52612536..52612547,- | |||
|ontology_enrichment_celltype=CL:0000188!1.15e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.09e-44;3!UBERON:0003057;1.09e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p9@BCAS1 | |||
}} | }} |
Latest revision as of 02:14, 17 September 2015
Short description: | p9@BCAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_BCAS1_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | -68bp_to_ENST00000422805_5end |
EntrezGene: | BCAS1 |
HGNC: | 974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.77e-45 | 3 |
dorsal region element | 9.77e-45 | 3 |
dorsum | 9.77e-45 | 3 |
substantia nigra | 3.61e-34 | 1 |
midbrain nucleus | 3.61e-34 | 1 |
regional part of midbrain | 3.61e-34 | 1 |
midbrain | 3.61e-34 | 1 |
presumptive midbrain | 3.61e-34 | 1 |
midbrain neural tube | 3.61e-34 | 1 |
middle temporal gyrus | 1.27e-17 | 2 |
posterior neural tube | 7.75e-10 | 15 |
chordal neural plate | 7.75e-10 | 15 |
neural tube | 7.87e-10 | 56 |
neural rod | 7.87e-10 | 56 |
future spinal cord | 7.87e-10 | 56 |
neural keel | 7.87e-10 | 56 |
central nervous system | 6.64e-07 | 81 |
neural plate | 6.64e-07 | 82 |
presumptive neural plate | 6.64e-07 | 82 |
gyrus | 9.49e-07 | 6 |