FFCP PHASE1:Hg19::chr20:51588873..51588953,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:51588873..51588953,+
|short_description=p1@TSHZ2
|description=CAGE_peak_1_at_TSHZ2_5end
|association_with_transcript=0bp_to_ENST00000371497,NM_173485,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=128553 | |EntrezGene=128553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13010 | |HGNC=13010 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRE2 | |UniProt=Q9NRE2 | ||
|association_with_transcript=0bp_to_ENST00000371497,NM_173485,uc002xwo.2_5end | |||
|cluster_id=chr20:51588873..51588953,+ | |||
|description=CAGE_peak_1_at_TSHZ2_5end | |||
|id=chr20:51588873..51588953,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.90e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-39!115;UBERON:0001049!2.27e-14!57;UBERON:0005068!2.27e-14!57;UBERON:0006241!2.27e-14!57;UBERON:0007135!2.27e-14!57;UBERON:0003080!1.27e-11!42;UBERON:0002780!4.24e-11!41;UBERON:0001890!4.24e-11!41;UBERON:0006240!4.24e-11!41;UBERON:0000955!8.08e-11!69;UBERON:0006238!8.08e-11!69;UBERON:0002616!8.63e-11!59;UBERON:0002020!7.48e-10!34;UBERON:0003528!7.48e-10!34;UBERON:0003075!1.46e-09!86;UBERON:0007284!1.46e-09!86;UBERON:0001017!1.49e-09!82;UBERON:0001893!2.04e-09!34;UBERON:0000073!2.91e-09!94;UBERON:0001016!2.91e-09!94;UBERON:0002791!3.28e-09!33;UBERON:0005743!3.49e-09!86;UBERON:0002346!6.12e-09!90;UBERON:0001869!1.00e-08!32;UBERON:0002619!9.13e-08!22;UBERON:0000153!9.19e-08!129;UBERON:0007811!9.19e-08!129;UBERON:0000956!3.67e-07!25;UBERON:0000203!3.67e-07!25;UBERON:0001950!4.05e-07!20;UBERON:0000033!6.13e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.26e-12;114!UBERON:0001893;1.46e-09;34!UBERON:0002780;1.88e-09;41!UBERON:0001890;1.88e-09;41!UBERON:0003528;1.93e-09;34!UBERON:0002020;1.93e-09;34!UBERON:0002619;3.70e-09;22!UBERON:0002791;5.05e-09;32!UBERON:0001869;6.56e-09;32!UBERON:0001950;1.96e-08;20!UBERON:0000073;2.96e-08;53!UBERON:0002616;2.96e-08;53!UBERON:0000956;6.39e-08;25!UBERON:0000203;6.39e-08;25!UBERON:0000178;3.99e-07;15!UBERON:0000179;3.99e-07;15!UBERON:0000463;3.99e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.18e-45,114;UBERON:0001049,2.35e-15,56;UBERON:0005068,2.35e-15,56;UBERON:0006241,2.35e-15,56;UBERON:0007135,2.35e-15,56;UBERON:0000073,1.54e-13,53;UBERON:0002616,1.54e-13,53;UBERON:0002780,8.61e-13,41;UBERON:0001890,8.61e-13,41;UBERON:0003080,8.61e-13,41;UBERON:0006240,8.61e-13,41;UBERON:0003528,2.83e-11,34;UBERON:0002020,2.83e-11,34;UBERON:0001893,9.37e-11,34;UBERON:0000955,2.90e-10,68;UBERON:0006238,2.90e-10,68;UBERON:0003075,3.11e-10,82;UBERON:0007284,3.11e-10,82;UBERON:0002791,3.55e-10,32;UBERON:0011216,3.59e-10,223;UBERON:0001869,6.36e-10,32;UBERON:0001016,1.63e-09,89;UBERON:0002346,1.91e-09,86;UBERON:0001017,2.21e-09,81;UBERON:0002619,2.66e-09,22;UBERON:0001950,1.62e-08,20;UBERON:0000956,4.96e-08,25;UBERON:0000203,4.96e-08,25;UBERON:0000178,4.52e-07,15;UBERON:0000179,4.52e-07,15;UBERON:0000463,4.52e-07,15;UBERON:0010314,7.62e-07,132 | |||
|phase1_expression=1.2717486548939,2.35510576280081,3.66481450649525,2.00146596706261,3.12872766099101,0.872338524100369,2.53299878168311,1.89515962028049,11.4921676407929,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0,1.43117993565528,0.136874425072884,0.125542639594803,0.305653622991805,0.246301768349837,0.314843125254717,0.393364276848904,0,2.16742572642506,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0.293600439334847,0.553995408531877,1.80490002723128,4.34021741431704,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0,1.1384259382189,0.587237189370939,0.382273228125229,0,3.92355994087075,0,35.6044683906038,26.331721104194,11.308082444973,0.334372990781356,0.977766799900771,0.946895611469467,1.94826728407911,1.55974639639243,6.77593587192126,4.43067789167242,8.39491977671548,1.5370958367081,0.780356085359269,0.328875809207352,0,0.869409257205157,23.5775635427676,10.7016331235885,12.5442628565972,2.71942422474159,18.3945836928922,8.24705869158312,9.1087089127021,5.41561204350964,0.651083453856419,0.950452044448374,9.63680762097746,6.78329039118417,8.74515085866421,6.15620855314444,4.10563998460523,1.41124720257313,0.802320587350522,1.88271725047639,2.43806866313962,2.01210257911091,0.255725123687061,0,0,0,0,0,1.32348744029695,0.886917589850256,0.263504357079378,6.7454223881322,0,0.370784442784429,0,0,0.26591592103773,0,1.14398982156026,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0.33472061276467,1.20848795132744,0,0.732186172644509,0.367663080345869,0,0,0,0,0,0,0,0,0,0.872188104285069,0.993943903390637,0,0,0.573673241497627,0,1.12135520028461,0,1.72667283892012,4.97937656639626,0.269421344139376,0.163461903113459,0,0.576175924479999,0.234321431833797,1.24864030732128,0.570471821544449,0.448346041655403,1.40921398372518,0.809364721840658,0.702254033511242,0.204154171254893,0,0.309977343527296,0,1.7308685049499,0,1.43723628363248,0,0.500474079487857,0,0,0,1.35214253015937,0,3.22901344239952,2.98980344345994,3.39091041855299,8.40255069036326,12.4693560378511,3.86460810068444,2.97786970130544,7.25738228637445,6.13853132515551,6.05841058185875,2.76149695926898,14.5481451136931,2.13005755509969,1.81353776809752,0,0,0,0.286804595389004,0,0.397589304964456,0.348581828608555,0.725627385107593,0,0,0,0,0,0,0,2.60274960087657,4.21461725195254,1.92808823906786,3.41911315470421,2.61455332910887,2.84724742933316,3.64044532032444,3.13954344200554,3.8474715694639,0.738155454624648,0,0.4115740113314,1.47008711385542,8.87285243752816,6.87979051674338,15.3605375737165,0,0,0.514703430895577,0.878002283269004,0,0.301586917234893,0.740707561268237,0,0,0,0.34779121492523,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0.246217006087397,0,0,0,1.6798212819886,0.425325291727159,2.86587272649115,1.45316969256981,1.53353071666084,0,0,0.829312462163088,0.288239906833923,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,7.15312891703765,0.845302752556,0,0,0.514414748524284,0,0,1.85871391755592,0,0,1.30294473717494,0.710783897485092,0,5.12446941001296,1.74306691720059,4.1988656296464,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,4.53170748464433,6.68445482064504,6.16046574142792,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.601892199455438,0,0,0,0,0.347534457872331,0,0,6.40980880980951,9.49142483601914,6.40365346820666,0,0,0,1.98486246255021,1.99500565274481,2.24528075546459,3.33161788064823,8.18731598506726,0.64341568457443,1.48418066444991,0.925258162815933,2.66342587969691,0.98552587216571,0,2.78904908303902,0,0,0.276242966807689,0,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,6.69766575710195,0,0,0,0.650060246036521,0,2.03008508413456,4.62145851343933,6.7541616879497,0.827019434907183,6.01553371262332,4.78555089916954,2.13066568540252,6.58837063785856,0,0.192190067365106,1.53135254993501,0.30347334256665,0,0,0,0.924100740528266,0,0,0,0,0,0,0.190630193923825,0,0.855877976067841,3.5002357271853,0,0.719489830333259,5.76527762445715,2.35624804691373,0,0,0,0.48763373908959,0.487426979262569,0,0,0,3.39024349860728,1.10273068709225,0,0,0,0.655894752046633,0,0.92947049429925,0,0.143411352204052,0,0,1.06428319221179,10.1331664942879,21.0748731494337,0,0,0.288666338176536,0.670302275535787,0,6.40177845282098,0,1.68471475667626,1.7737206141467,0.459446800413919,2.53723804616085,4.58782324285425,4.5571774973933,5.24109906007136,4.11362273086194,5.18778648954174,7.02040868409549,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0.19538809540204,0,0,0,0,0,0,25.0528986554939,0,0,0,0,2.07875276582847,0,1.9882952955326,3.23539657744179,0.222617410045812,3.95529298144223,0,15.1428471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| ||
|short_description=p1@TSHZ2 | |||
}} | }} |
Latest revision as of 00:49, 17 September 2015
Short description: | p1@TSHZ2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSHZ2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371497, NM_173485, uc002xwo.2_5end |
EntrezGene: | TSHZ2 |
HGNC: | 13010 |
UniProt: | Q9NRE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.18e-45 | 114 |
neural tube | 2.35e-15 | 56 |
neural rod | 2.35e-15 | 56 |
future spinal cord | 2.35e-15 | 56 |
neural keel | 2.35e-15 | 56 |
regional part of nervous system | 1.54e-13 | 53 |
regional part of brain | 1.54e-13 | 53 |
regional part of forebrain | 8.61e-13 | 41 |
forebrain | 8.61e-13 | 41 |
anterior neural tube | 8.61e-13 | 41 |
future forebrain | 8.61e-13 | 41 |
brain grey matter | 2.83e-11 | 34 |
gray matter | 2.83e-11 | 34 |
telencephalon | 9.37e-11 | 34 |
brain | 2.90e-10 | 68 |
future brain | 2.90e-10 | 68 |
neural plate | 3.11e-10 | 82 |
presumptive neural plate | 3.11e-10 | 82 |
regional part of telencephalon | 3.55e-10 | 32 |
organ system subdivision | 3.59e-10 | 223 |
cerebral hemisphere | 6.36e-10 | 32 |
nervous system | 1.63e-09 | 89 |
neurectoderm | 1.91e-09 | 86 |
central nervous system | 2.21e-09 | 81 |
regional part of cerebral cortex | 2.66e-09 | 22 |
neocortex | 1.62e-08 | 20 |
cerebral cortex | 4.96e-08 | 25 |
pallium | 4.96e-08 | 25 |
blood | 4.52e-07 | 15 |
haemolymphatic fluid | 4.52e-07 | 15 |
organism substance | 4.52e-07 | 15 |
structure with developmental contribution from neural crest | 7.62e-07 | 132 |