FFCP PHASE1:Hg19::chr1:201508829..201508877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:201508829..201508877,+ | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr1:201508829..201508877,+ | |description=CAGE_peak_at_chr1:201508829..201508877,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0000306,1.13e-13,4;CL:0002222,1.13e-13,4;CL:0002224,1.13e-13,4;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3 | |ontology_enrichment_development_v019=CL:0000377;1.03e-17;3 | ||
|ontology_enrichment_disease=DOID:3095!2.19e-07!22;DOID:2994!2.19e-07!22;DOID:0050687!4.85e-07!143;DOID:171!7.31e-07!10 | |ontology_enrichment_disease=DOID:3095!2.19e-07!22;DOID:2994!2.19e-07!22;DOID:0050687!4.85e-07!143;DOID:171!7.31e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.59e-07;8 | |ontology_enrichment_disease_v019=DOID:1036;1.59e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.59e-07,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.13e-13,4;UBERON:0005389,1.13e-13,4;UBERON:0000484,1.13e-13,4;UBERON:0002546,1.13e-13,4;UBERON:0000965,1.13e-13,4;UBERON:0001803,1.13e-13,4;UBERON:0003073,1.13e-13,4;UBERON:0005426,1.13e-13,4;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7;UBERON:0000076,1.69e-07,8 | |||
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| ||
|short_description=p@chr1:201508829..201508877,+ | |short_description=p@chr1:201508829..201508877,+ | ||
}} | }} |
Latest revision as of 02:10, 28 July 2015
Short description: | p@chr1:201508829..201508877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201508829..201508877, + |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
crystallin accumulating cell | 1.13e-13 | 4 |
vertebrate lens cell | 1.13e-13 | 4 |
lens epithelial cell | 1.13e-13 | 4 |
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.13e-13 | 4 |
transparent eye structure | 1.13e-13 | 4 |
simple cuboidal epithelium | 1.13e-13 | 4 |
cranial placode | 1.13e-13 | 4 |
lens of camera-type eye | 1.13e-13 | 4 |
epithelium of lens | 1.13e-13 | 4 |
lens placode | 1.13e-13 | 4 |
lens vesicle | 1.13e-13 | 4 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
external ectoderm | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.59e-07 | 8 |