FFCP PHASE1:Hg19::chr22:44577325..44577356,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64098 | |EntrezGene=64098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |HGNC=14654 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYN0 | |UniProt=B0QYN0 | ||
|association_with_transcript=47bp_to_ENST00000417767_5end | |association_with_transcript=47bp_to_ENST00000417767_5end | ||
|cluster_id=chr22:44577325..44577356,+ | |||
|description=CAGE_peak_11_at_PARVG_5end | |description=CAGE_peak_11_at_PARVG_5end | ||
|id=chr22:44577325..44577356,+ | |id=chr22:44577325..44577356,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.96e-61!172;CL:0000566!8.96e-61!172;CL:0000988!1.05e-55!182;CL:0000763!1.14e-55!112;CL:0000049!1.14e-55!112;CL:0002032!3.99e-55!165;CL:0000837!3.99e-55!165;CL:0000738!5.12e-41!140;CL:0000766!1.07e-37!76;CL:0000557!3.95e-34!71;CL:0002087!1.70e-31!119;CL:0000839!3.15e-31!70;CL:0002031!1.26e-30!124;CL:0002009!4.62e-30!65;CL:0002194!8.89e-30!63;CL:0000576!8.89e-30!63;CL:0000040!8.89e-30!63;CL:0000559!8.89e-30!63;CL:0002057!1.50e-21!42;CL:0000860!1.84e-19!45;CL:0000134!2.42e-15!358;CL:0002320!1.64e-14!365;CL:0000219!1.22e-11!390;CL:0002393!9.41e-09!9;CL:0002397!9.41e-09!9;CL:0000048!1.05e-08!430;CL:0000723!3.04e-08!436;CL:0000034!4.16e-08!444;CL:0000451!2.88e-07!10 | |ontology_enrichment_celltype=CL:0000037!8.96e-61!172;CL:0000566!8.96e-61!172;CL:0000988!1.05e-55!182;CL:0000763!1.14e-55!112;CL:0000049!1.14e-55!112;CL:0002032!3.99e-55!165;CL:0000837!3.99e-55!165;CL:0000738!5.12e-41!140;CL:0000766!1.07e-37!76;CL:0000557!3.95e-34!71;CL:0002087!1.70e-31!119;CL:0000839!3.15e-31!70;CL:0002031!1.26e-30!124;CL:0002009!4.62e-30!65;CL:0002194!8.89e-30!63;CL:0000576!8.89e-30!63;CL:0000040!8.89e-30!63;CL:0000559!8.89e-30!63;CL:0002057!1.50e-21!42;CL:0000860!1.84e-19!45;CL:0000134!2.42e-15!358;CL:0002320!1.64e-14!365;CL:0000219!1.22e-11!390;CL:0002393!9.41e-09!9;CL:0002397!9.41e-09!9;CL:0000048!1.05e-08!430;CL:0000723!3.04e-08!436;CL:0000034!4.16e-08!444;CL:0000451!2.88e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000763;1.44e-15;100!CL:0000235;5.00e-09;6!CL:0000784;5.44e-08;3!CL:0002032;5.25e-07;1!CL:0000557;5.25e-07;1 | |ontology_enrichment_celltype_v019=CL:0000763;1.44e-15;100!CL:0000235;5.00e-09;6!CL:0000784;5.44e-08;3!CL:0002032;5.25e-07;1!CL:0000557;5.25e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.78e-42,108;CL:0000049,1.78e-42,108;CL:0000037,3.95e-27,168;CL:0002032,1.43e-26,161;CL:0000837,1.43e-26,161;CL:0000988,1.93e-25,177;CL:0000766,1.53e-13,72;CL:0000557,9.18e-13,67;CL:0002194,1.23e-12,59;CL:0000576,1.23e-12,59;CL:0000040,1.23e-12,59;CL:0000559,1.23e-12,59;CL:0002009,3.82e-12,61;CL:0000839,4.82e-11,66;CL:0000134,1.43e-09,354;CL:0002320,2.93e-09,361;CL:0000235,5.28e-09,6;CL:0000219,3.63e-08,386;CL:0000784,6.50e-08,3;CL:0000034,4.18e-07,441;CL:0000048,7.88e-07,427;CL:0000738,9.73e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000049;1.01e-14;108 | |ontology_enrichment_development_v019=CL:0000049;1.01e-14;108 | ||
|ontology_enrichment_disease=DOID:8692!1.11e-21!31;DOID:1240!2.40e-21!39;DOID:2531!2.69e-15!51;DOID:0060083!2.69e-15!51 | |ontology_enrichment_disease=DOID:8692!1.11e-21!31;DOID:1240!2.40e-21!39;DOID:2531!2.69e-15!51;DOID:0060083!2.69e-15!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.75e-52;31!DOID:1240;9.93e-35;39!DOID:2531;4.29e-20;51!DOID:0060083;4.29e-20;51 | |ontology_enrichment_disease_v019=DOID:8692;8.75e-52;31!DOID:1240;9.93e-35;39!DOID:2531;4.29e-20;51!DOID:0060083;4.29e-20;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.04e-54,31;DOID:1240,1.95e-42,39;DOID:2531,1.65e-31,51;DOID:0060083,1.65e-31,51;DOID:0050686,3.66e-09,137;DOID:225,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-36!102;UBERON:0003061!1.54e-36!102;UBERON:0002193!4.34e-34!112;UBERON:0002371!5.05e-30!80;UBERON:0001474!3.05e-29!86;UBERON:0004765!1.45e-24!101;UBERON:0001434!1.45e-24!101;UBERON:0002405!1.45e-23!115;UBERON:0002384!2.17e-13!375;UBERON:0002204!2.45e-09!167;UBERON:0003081!6.73e-09!216 | |ontology_enrichment_uberon=UBERON:0002390!1.54e-36!102;UBERON:0003061!1.54e-36!102;UBERON:0002193!4.34e-34!112;UBERON:0002371!5.05e-30!80;UBERON:0001474!3.05e-29!86;UBERON:0004765!1.45e-24!101;UBERON:0001434!1.45e-24!101;UBERON:0002405!1.45e-23!115;UBERON:0002384!2.17e-13!375;UBERON:0002204!2.45e-09!167;UBERON:0003081!6.73e-09!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.17e-11,76;UBERON:0002390,1.35e-10,98;UBERON:0003061,1.35e-10,98;UBERON:0001474,6.12e-10,82;UBERON:0002193,2.55e-09,108;UBERON:0002384,7.75e-09,371;UBERON:0004765,8.09e-09,90;UBERON:0002405,1.90e-08,93;UBERON:0001434,1.14e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,0.587200878669695,0,0.200544447470142,0.651032612147555,1.34349284543955,0.32389366601898,0,0.581592955118259,1.13362783106643,0.485168122375632,0,0.411167888021826,0.619412741790207,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0,0.674170453335254,0.918251677112708,0,0,0.659702600373432,0.199463657621632,0.852449501065388,0,0,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0.633765858935825,0.850417199860174,1.04829322754188,0.44931452458598,1.05123824989054,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.764546456250458,0,0,1.05353633910031,0.196709770113833,0,0,0.83593247695339,0,0,0,0.779873198196215,0,0.221533894583621,0.270803863765016,0.512365278902701,0.130059347559878,0.328875809207352,0.829050053357545,0.289803085735052,0,0.267540828089713,0,0.566546713487831,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,1.46253756570752,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,10.2961876661265,4.01304138179566,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0.513372145118994,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.70894156152249,0.714695326373367,0,0.648473311192717,1.08006287447623,0,0,0,0,0.371606350251437,0,0,0.159426272728822,1.39705560002972,3.83010740264733,11.2186998843658,1.29848776109822,1.96558024679421,9.35762184036088,0.313359791546046,2.50634477090067,4.23229444504008,2.89058535186659,6.05399121573143,3.40676990152261,3.09154810280188,3.99412993600995,4.02616994206349,4.17122854279771,1.17232857241224,0,1.23087398947712,0.270455678475983,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98262487150547,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,1.38699248602383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,0.587200878669695,0,0.200544447470142,0.651032612147555,1.34349284543955,0.32389366601898,0,0.581592955118259,1.13362783106643,0.485168122375632,0,0.411167888021826,0.619412741790207,0.575384784644301,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0,0.674170453335254,0.918251677112708,0,0,0.659702600373432,0.199463657621632,0.852449501065388,0,0,0,0,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0.633765858935825,0.850417199860174,1.04829322754188,0.44931452458598,1.05123824989054,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.764546456250458,0,0,1.05353633910031,0.196709770113833,0,0,0.83593247695339,0,0,0,0.779873198196215,0,0.221533894583621,0.270803863765016,0.512365278902701,0.130059347559878,0.328875809207352,0.829050053357545,0.289803085735052,0,0.267540828089713,0,0.566546713487831,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,1.46253756570752,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,10.2961876661265,4.01304138179566,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0.513372145118994,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.70894156152249,0.714695326373367,0,0.648473311192717,1.08006287447623,0,0,0,0,0.371606350251437,0,0,0.159426272728822,1.39705560002972,3.83010740264733,11.2186998843658,1.29848776109822,1.96558024679421,9.35762184036088,0.313359791546046,2.50634477090067,4.23229444504008,2.89058535186659,6.05399121573143,3.40676990152261,3.09154810280188,3.99412993600995,4.02616994206349,4.17122854279771,1.17232857241224,0,1.23087398947712,0.270455678475983,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98262487150547,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,1.38699248602383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | ||
|short_description=p11@PARVG | |short_description=p11@PARVG | ||
}} | }} |
Latest revision as of 02:31, 25 September 2015
Short description: | p11@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PARVG_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000417767_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | B0QYN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.78e-42 | 108 |
common myeloid progenitor | 1.78e-42 | 108 |
hematopoietic stem cell | 3.95e-27 | 168 |
hematopoietic oligopotent progenitor cell | 1.43e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-26 | 161 |
hematopoietic cell | 1.93e-25 | 177 |
myeloid leukocyte | 1.53e-13 | 72 |
granulocyte monocyte progenitor cell | 9.18e-13 | 67 |
monopoietic cell | 1.23e-12 | 59 |
monocyte | 1.23e-12 | 59 |
monoblast | 1.23e-12 | 59 |
promonocyte | 1.23e-12 | 59 |
macrophage dendritic cell progenitor | 3.82e-12 | 61 |
myeloid lineage restricted progenitor cell | 4.82e-11 | 66 |
mesenchymal cell | 1.43e-09 | 354 |
connective tissue cell | 2.93e-09 | 361 |
macrophage | 5.28e-09 | 6 |
motile cell | 3.63e-08 | 386 |
plasmacytoid dendritic cell | 6.50e-08 | 3 |
stem cell | 4.18e-07 | 441 |
multi fate stem cell | 7.88e-07 | 427 |
leukocyte | 9.73e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.17e-11 | 76 |
hematopoietic system | 1.35e-10 | 98 |
blood island | 1.35e-10 | 98 |
bone element | 6.12e-10 | 82 |
hemolymphoid system | 2.55e-09 | 108 |
connective tissue | 7.75e-09 | 371 |
skeletal element | 8.09e-09 | 90 |
immune system | 1.90e-08 | 93 |
skeletal system | 1.14e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.04e-54 | 31 |
leukemia | 1.95e-42 | 39 |
hematologic cancer | 1.65e-31 | 51 |
immune system cancer | 1.65e-31 | 51 |
organ system cancer | 3.66e-09 | 137 |
syndrome | 9.79e-07 | 1 |