FFCP PHASE1:Hg19::chr17:72733350..72733373,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=326624 | |EntrezGene=326624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30268 | |HGNC=30268 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTC6,A8MXF5,Q96AX2,E9PMZ4 | |UniProt=A8MTC6,A8MXF5,Q96AX2,E9PMZ4 | ||
|association_with_transcript=0bp_to_ENST00000392610,ENST00000392612,ENST00000392613,ENST00000527040,ENST00000533530,NM_001006638,NM_001163990,uc002jlk.2,uc002jll.3,uc010wre.1_5end | |association_with_transcript=0bp_to_ENST00000392610,ENST00000392612,ENST00000392613,ENST00000527040,ENST00000533530,NM_001006638,NM_001163990,uc002jlk.2,uc002jll.3,uc010wre.1_5end | ||
|cluster_id=chr17:72733350..72733373,+ | |||
|coexpression_cluster_id=C3675 | |coexpression_cluster_id=C3675 | ||
|description=CAGE_peak_2_at_RAB37_5end | |description=CAGE_peak_2_at_RAB37_5end | ||
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|ontology_enrichment_celltype=CL:0000037!6.87e-54!172;CL:0000566!6.87e-54!172;CL:0000988!9.41e-52!182;CL:0002032!4.76e-50!165;CL:0000837!4.76e-50!165;CL:0000738!7.70e-41!140;CL:0002031!1.39e-33!124;CL:0002087!2.60e-32!119;CL:0000763!2.02e-27!112;CL:0000049!2.02e-27!112;CL:0000542!1.32e-20!53;CL:0000051!1.32e-20!53;CL:0000838!1.51e-20!52;CL:0000766!3.62e-18!76;CL:0002057!5.08e-18!42;CL:0000860!1.09e-15!45;CL:0000084!1.73e-15!25;CL:0000827!1.73e-15!25;CL:0000839!1.17e-14!70;CL:0000557!1.14e-13!71;CL:0000791!1.67e-13!18;CL:0000789!1.67e-13!18;CL:0002420!1.67e-13!18;CL:0002419!1.67e-13!18;CL:0000790!1.67e-13!18;CL:0002194!4.27e-11!63;CL:0000576!4.27e-11!63;CL:0000040!4.27e-11!63;CL:0000559!4.27e-11!63;CL:0002009!2.91e-10!65;CL:0000625!3.88e-09!11;CL:0002320!4.68e-09!365;CL:0000134!2.80e-08!358;CL:0000236!9.12e-08!14 | |ontology_enrichment_celltype=CL:0000037!6.87e-54!172;CL:0000566!6.87e-54!172;CL:0000988!9.41e-52!182;CL:0002032!4.76e-50!165;CL:0000837!4.76e-50!165;CL:0000738!7.70e-41!140;CL:0002031!1.39e-33!124;CL:0002087!2.60e-32!119;CL:0000763!2.02e-27!112;CL:0000049!2.02e-27!112;CL:0000542!1.32e-20!53;CL:0000051!1.32e-20!53;CL:0000838!1.51e-20!52;CL:0000766!3.62e-18!76;CL:0002057!5.08e-18!42;CL:0000860!1.09e-15!45;CL:0000084!1.73e-15!25;CL:0000827!1.73e-15!25;CL:0000839!1.17e-14!70;CL:0000557!1.14e-13!71;CL:0000791!1.67e-13!18;CL:0000789!1.67e-13!18;CL:0002420!1.67e-13!18;CL:0002419!1.67e-13!18;CL:0000790!1.67e-13!18;CL:0002194!4.27e-11!63;CL:0000576!4.27e-11!63;CL:0000040!4.27e-11!63;CL:0000559!4.27e-11!63;CL:0002009!2.91e-10!65;CL:0000625!3.88e-09!11;CL:0002320!4.68e-09!365;CL:0000134!2.80e-08!358;CL:0000236!9.12e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.77e-20;25!CL:0000791;2.66e-17;18!CL:0000789;2.66e-17;18!CL:0002419;2.66e-17;18!CL:0000860;1.08e-15;33!CL:0002057;1.08e-15;33!CL:0000542;3.78e-14;53!CL:0002087;3.40e-13;104!CL:0000763;4.46e-13;100!CL:0000576;1.64e-12;48!CL:0000766;7.06e-12;69!CL:0000625;1.53e-11;11!CL:0000988;2.53e-11;177!CL:0000473;3.32e-10;39!CL:0000234;3.32e-10;39!CL:0000738;4.34e-10;136!CL:0000236;2.97e-09;13!CL:0000094;8.77e-08;8!CL:0000097;6.40e-07;5 | |ontology_enrichment_celltype_v019=CL:0000084;3.77e-20;25!CL:0000791;2.66e-17;18!CL:0000789;2.66e-17;18!CL:0002419;2.66e-17;18!CL:0000860;1.08e-15;33!CL:0002057;1.08e-15;33!CL:0000542;3.78e-14;53!CL:0002087;3.40e-13;104!CL:0000763;4.46e-13;100!CL:0000576;1.64e-12;48!CL:0000766;7.06e-12;69!CL:0000625;1.53e-11;11!CL:0000988;2.53e-11;177!CL:0000473;3.32e-10;39!CL:0000234;3.32e-10;39!CL:0000738;4.34e-10;136!CL:0000236;2.97e-09;13!CL:0000094;8.77e-08;8!CL:0000097;6.40e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.09e-62,168;CL:0000988,1.87e-61,177;CL:0002032,4.46e-59,161;CL:0000837,4.46e-59,161;CL:0000738,3.80e-45,136;CL:0002031,2.87e-40,120;CL:0002087,1.79e-37,115;CL:0000763,1.65e-33,108;CL:0000049,1.65e-33,108;CL:0000838,2.20e-23,52;CL:0000860,2.86e-23,42;CL:0002057,2.86e-23,42;CL:0000542,1.20e-22,53;CL:0000051,1.20e-22,53;CL:0000766,1.59e-22,72;CL:0000084,3.42e-20,25;CL:0000827,3.42e-20,25;CL:0000473,1.17e-18,48;CL:0000234,1.17e-18,48;CL:0000839,6.65e-18,66;CL:0000791,2.63e-17,18;CL:0000789,2.63e-17,18;CL:0002420,2.63e-17,18;CL:0002419,2.63e-17,18;CL:0000790,2.63e-17,18;CL:0000557,6.73e-17,67;CL:0002194,3.16e-13,59;CL:0000576,3.16e-13,59;CL:0000040,3.16e-13,59;CL:0000559,3.16e-13,59;CL:0002009,2.10e-12,61;CL:0002320,1.01e-11,361;CL:0000625,1.50e-11,11;CL:0000134,1.92e-11,354;CL:0000236,5.51e-10,14;CL:0000219,2.90e-08,386;CL:0000094,7.96e-08,8;CL:0002393,1.08e-07,9;CL:0002397,1.08e-07,9;CL:0000097,6.57e-07,5;CL:0002028,6.57e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;2.66e-17;18!CL:0002057;6.72e-17;42!CL:0000051;3.78e-14;53!CL:0000049;1.13e-09;108 | |ontology_enrichment_development_v019=CL:0000790;2.66e-17;18!CL:0002057;6.72e-17;42!CL:0000051;3.78e-14;53!CL:0000049;1.13e-09;108 | ||
|ontology_enrichment_disease=DOID:1240!3.36e-12!39;DOID:8692!1.24e-09!31;DOID:2531!2.80e-09!51;DOID:0060083!2.80e-09!51 | |ontology_enrichment_disease=DOID:1240!3.36e-12!39;DOID:8692!1.24e-09!31;DOID:2531!2.80e-09!51;DOID:0060083!2.80e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.40e-10;31!DOID:1240;5.97e-10;39!DOID:2531;2.49e-07;51!DOID:0060083;2.49e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;5.40e-10;31!DOID:1240;5.97e-10;39!DOID:2531;2.49e-07;51!DOID:0060083;2.49e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,2.42e-13,39;DOID:8692,1.44e-10,31;DOID:2531,1.47e-10,51;DOID:0060083,1.47e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.51e-21!102;UBERON:0003061!4.51e-21!102;UBERON:0002193!1.01e-18!112;UBERON:0000178!1.68e-11!15;UBERON:0000179!1.68e-11!15;UBERON:0000463!1.68e-11!15;UBERON:0002405!2.72e-11!115;UBERON:0002371!7.13e-11!80;UBERON:0001474!8.26e-10!86;UBERON:0002384!1.37e-08!375;UBERON:0004765!6.05e-07!101;UBERON:0001434!6.05e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!4.51e-21!102;UBERON:0003061!4.51e-21!102;UBERON:0002193!1.01e-18!112;UBERON:0000178!1.68e-11!15;UBERON:0000179!1.68e-11!15;UBERON:0000463!1.68e-11!15;UBERON:0002405!2.72e-11!115;UBERON:0002371!7.13e-11!80;UBERON:0001474!8.26e-10!86;UBERON:0002384!1.37e-08!375;UBERON:0004765!6.05e-07!101;UBERON:0001434!6.05e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-14;15!UBERON:0000179;1.55e-14;15!UBERON:0000463;1.55e-14;15!UBERON:0002390;2.84e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-14;15!UBERON:0000179;1.55e-14;15!UBERON:0000463;1.55e-14;15!UBERON:0002390;2.84e-09;32 | ||
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| ||
|short_description=p2@RAB37 | |short_description=p2@RAB37 | ||
}} | }} |
Latest revision as of 08:47, 17 September 2015
Short description: | p2@RAB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB37_5end |
Coexpression cluster: | C3675_Mast_Whole_blood_acute_NK_Neutrophils_CD34 |
Association with transcript: | 0bp_to_ENST00000392610, ENST00000392612, ENST00000392613, ENST00000527040, ENST00000533530, NM_001006638, NM_001163990, uc002jlk.2, uc002jll.3, uc010wre.1_5end |
EntrezGene: | RAB37 |
HGNC: | 30268 |
UniProt: | A8MTC6A8MXF5Q96AX2E9PMZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.09e-28 | 98 |
blood island | 4.09e-28 | 98 |
hemolymphoid system | 2.35e-25 | 108 |
immune system | 2.43e-15 | 93 |
blood | 1.16e-14 | 15 |
haemolymphatic fluid | 1.16e-14 | 15 |
organism substance | 1.16e-14 | 15 |
bone marrow | 3.30e-14 | 76 |
bone element | 3.97e-12 | 82 |
skeletal element | 4.70e-11 | 90 |
connective tissue | 1.72e-10 | 371 |
skeletal system | 1.31e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.42e-13 | 39 |
myeloid leukemia | 1.44e-10 | 31 |
hematologic cancer | 1.47e-10 | 51 |
immune system cancer | 1.47e-10 | 51 |