FFCP PHASE1:Hg19::chr17:6659354..6659398,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54739 | |EntrezGene=54739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30932 | |HGNC=30932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002gdp.2,uc002gdq.2,uc002gdr.2_5end | |association_with_transcript=0bp_to_uc002gdp.2,uc002gdq.2,uc002gdr.2_5end | ||
|cluster_id=chr17:6659354..6659398,+ | |||
|coexpression_cluster_id=C413 | |coexpression_cluster_id=C413 | ||
|description=CAGE_peak_1_at_XAF1_5end | |description=CAGE_peak_1_at_XAF1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.17e-34!140;CL:0002087!1.65e-31!119;CL:0002031!7.69e-31!124;CL:0000037!1.60e-28!172;CL:0000566!1.60e-28!172;CL:0002032!1.36e-26!165;CL:0000837!1.36e-26!165;CL:0000766!1.27e-25!76;CL:0000988!8.88e-24!182;CL:0000839!1.82e-21!70;CL:0002057!8.07e-21!42;CL:0002194!2.67e-20!63;CL:0000576!2.67e-20!63;CL:0000040!2.67e-20!63;CL:0000559!2.67e-20!63;CL:0000557!6.17e-20!71;CL:0002009!1.08e-18!65;CL:0000860!3.46e-17!45;CL:0000763!7.04e-16!112;CL:0000049!7.04e-16!112;CL:0000134!2.24e-12!358;CL:0002320!3.52e-11!365;CL:0000838!6.86e-11!52;CL:0000542!2.39e-10!53;CL:0000051!2.39e-10!53;CL:0000048!2.92e-07!430;CL:0000791!3.16e-07!18;CL:0000789!3.16e-07!18;CL:0002420!3.16e-07!18;CL:0002419!3.16e-07!18;CL:0000790!3.16e-07!18;CL:0000219!5.72e-07!390 | |ontology_enrichment_celltype=CL:0000738!1.17e-34!140;CL:0002087!1.65e-31!119;CL:0002031!7.69e-31!124;CL:0000037!1.60e-28!172;CL:0000566!1.60e-28!172;CL:0002032!1.36e-26!165;CL:0000837!1.36e-26!165;CL:0000766!1.27e-25!76;CL:0000988!8.88e-24!182;CL:0000839!1.82e-21!70;CL:0002057!8.07e-21!42;CL:0002194!2.67e-20!63;CL:0000576!2.67e-20!63;CL:0000040!2.67e-20!63;CL:0000559!2.67e-20!63;CL:0000557!6.17e-20!71;CL:0002009!1.08e-18!65;CL:0000860!3.46e-17!45;CL:0000763!7.04e-16!112;CL:0000049!7.04e-16!112;CL:0000134!2.24e-12!358;CL:0002320!3.52e-11!365;CL:0000838!6.86e-11!52;CL:0000542!2.39e-10!53;CL:0000051!2.39e-10!53;CL:0000048!2.92e-07!430;CL:0000791!3.16e-07!18;CL:0000789!3.16e-07!18;CL:0002420!3.16e-07!18;CL:0002419!3.16e-07!18;CL:0000790!3.16e-07!18;CL:0000219!5.72e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-15;33!CL:0002057;1.38e-15;33!CL:0000576;1.09e-14;48!CL:0000473;2.77e-14;39!CL:0000234;2.77e-14;39!CL:0000766;5.53e-13;69!CL:0002087;1.89e-10;104!CL:0000738;1.77e-08;136!CL:0000791;2.14e-07;18!CL:0000789;2.14e-07;18!CL:0002419;2.14e-07;18!CL:0000763;3.58e-07;100!CL:0000084;6.67e-07;25 | |ontology_enrichment_celltype_v019=CL:0000860;1.38e-15;33!CL:0002057;1.38e-15;33!CL:0000576;1.09e-14;48!CL:0000473;2.77e-14;39!CL:0000234;2.77e-14;39!CL:0000766;5.53e-13;69!CL:0002087;1.89e-10;104!CL:0000738;1.77e-08;136!CL:0000791;2.14e-07;18!CL:0000789;2.14e-07;18!CL:0002419;2.14e-07;18!CL:0000763;3.58e-07;100!CL:0000084;6.67e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.08e-38,136;CL:0002087,2.36e-35,115;CL:0002031,1.43e-34,120;CL:0000037,1.47e-31,168;CL:0000766,4.72e-30,72;CL:0002032,1.57e-29,161;CL:0000837,1.57e-29,161;CL:0000988,5.38e-27,177;CL:0000839,1.53e-25,66;CL:0002194,1.79e-24,59;CL:0000576,1.79e-24,59;CL:0000040,1.79e-24,59;CL:0000559,1.79e-24,59;CL:0000557,1.12e-23,67;CL:0000473,8.08e-23,48;CL:0000234,8.08e-23,48;CL:0002009,1.86e-22,61;CL:0000860,2.26e-21,42;CL:0002057,2.26e-21,42;CL:0000763,1.96e-18,108;CL:0000049,1.96e-18,108;CL:0000134,2.00e-12,354;CL:0000838,4.08e-11,52;CL:0002320,7.77e-11,361;CL:0000542,1.77e-10,53;CL:0000051,1.77e-10,53;CL:0000791,2.17e-07,18;CL:0000789,2.17e-07,18;CL:0002420,2.17e-07,18;CL:0002419,2.17e-07,18;CL:0000790,2.17e-07,18;CL:0000219,2.85e-07,386;CL:0000084,7.67e-07,25;CL:0000827,7.67e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;4.20e-15;42!CL:0000790;2.14e-07;18 | |ontology_enrichment_development_v019=CL:0002057;4.20e-15;42!CL:0000790;2.14e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.14e-23!102;UBERON:0003061!4.14e-23!102;UBERON:0002193!6.18e-21!112;UBERON:0002371!1.29e-17!80;UBERON:0002405!7.66e-15!115;UBERON:0007023!2.53e-14!115;UBERON:0001474!1.26e-13!86;UBERON:0004765!2.45e-12!101;UBERON:0001434!2.45e-12!101;UBERON:0002384!2.09e-10!375;UBERON:0002204!6.91e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!4.14e-23!102;UBERON:0003061!4.14e-23!102;UBERON:0002193!6.18e-21!112;UBERON:0002371!1.29e-17!80;UBERON:0002405!7.66e-15!115;UBERON:0007023!2.53e-14!115;UBERON:0001474!1.26e-13!86;UBERON:0004765!2.45e-12!101;UBERON:0001434!2.45e-12!101;UBERON:0002384!2.09e-10!375;UBERON:0002204!6.91e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@XAF1 | |short_description=p1@XAF1 | ||
}} | }} |
Latest revision as of 00:27, 17 September 2015
Short description: | p1@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XAF1_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_uc002gdp.2, uc002gdq.2, uc002gdr.2_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.46e-27 | 98 |
blood island | 7.46e-27 | 98 |
hemolymphoid system | 4.61e-24 | 108 |
bone marrow | 5.39e-21 | 76 |
immune system | 8.94e-21 | 93 |
bone element | 1.19e-16 | 82 |
adult organism | 1.53e-14 | 114 |
skeletal element | 1.03e-13 | 90 |
skeletal system | 3.61e-13 | 100 |
connective tissue | 5.67e-10 | 371 |
lateral plate mesoderm | 7.60e-09 | 203 |