FFCP PHASE1:Hg19::chr17:7608540..7608553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1949 | |EntrezGene=1949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3228 | |HGNC=3228 | ||
|TSSclassifier=strong | |||
|UniProt=Q15768 | |UniProt=Q15768 | ||
|association_with_transcript=20bp_to_ENST00000226091,NM_001406,uc002gis.2_5end | |association_with_transcript=20bp_to_ENST00000226091,NM_001406,uc002gis.2_5end | ||
|cluster_id=chr17:7608540..7608553,+ | |||
|coexpression_cluster_id=C3689 | |coexpression_cluster_id=C3689 | ||
|description=CAGE_peak_2_at_EFNB3_5end | |description=CAGE_peak_2_at_EFNB3_5end | ||
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|ontology_enrichment_celltype=CL:0000133!1.11e-10!59;CL:0000221!3.92e-08!71;CL:0002319!1.85e-07!25 | |ontology_enrichment_celltype=CL:0000133!1.11e-10!59;CL:0000221!3.92e-08!71;CL:0002319!1.85e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;9.29e-08;25!CL:0000540;1.75e-07;6!CL:0000404;1.75e-07;6 | |ontology_enrichment_celltype_v019=CL:0002319;9.29e-08;25!CL:0000540;1.75e-07;6!CL:0000404;1.75e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.53e-10,59;CL:0000047,2.30e-09,8;CL:0002319,8.49e-08,25;CL:0000221,1.24e-07,72;CL:0000540,1.43e-07,6;CL:0000031,1.43e-07,6;CL:0000404,1.43e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;1.75e-07;6 | |ontology_enrichment_development_v019=CL:0000031;1.75e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-30!82;UBERON:0005743!3.09e-30!86;UBERON:0000073!4.79e-29!94;UBERON:0001016!4.79e-29!94;UBERON:0002346!7.42e-25!90;UBERON:0000955!1.76e-23!69;UBERON:0006238!1.76e-23!69;UBERON:0000924!2.29e-23!173;UBERON:0006601!2.29e-23!173;UBERON:0003075!4.60e-23!86;UBERON:0007284!4.60e-23!86;UBERON:0001049!8.96e-23!57;UBERON:0005068!8.96e-23!57;UBERON:0006241!8.96e-23!57;UBERON:0007135!8.96e-23!57;UBERON:0004121!9.09e-22!169;UBERON:0001893!7.03e-21!34;UBERON:0001869!8.50e-21!32;UBERON:0002616!1.17e-20!59;UBERON:0002020!2.52e-20!34;UBERON:0003528!2.52e-20!34;UBERON:0002791!3.81e-20!33;UBERON:0002780!4.33e-20!41;UBERON:0001890!4.33e-20!41;UBERON:0006240!4.33e-20!41;UBERON:0003056!1.81e-19!61;UBERON:0000033!2.09e-19!123;UBERON:0003080!3.99e-19!42;UBERON:0000153!2.63e-18!129;UBERON:0007811!2.63e-18!129;UBERON:0000956!1.27e-16!25;UBERON:0000203!1.27e-16!25;UBERON:0002619!3.06e-16!22;UBERON:0001950!5.92e-15!20;UBERON:0000119!1.52e-12!312;UBERON:0000483!3.36e-12!309;UBERON:0000475!9.87e-12!365;UBERON:0000481!4.44e-11!347;UBERON:0000025!8.65e-10!194;UBERON:0000064!1.10e-09!219;UBERON:0004111!2.07e-08!241;UBERON:0007023!1.17e-07!115;UBERON:0000922!2.82e-07!612;UBERON:0000468!3.41e-07!659;UBERON:0000477!3.60e-07!286 | |ontology_enrichment_uberon=UBERON:0001017!1.92e-30!82;UBERON:0005743!3.09e-30!86;UBERON:0000073!4.79e-29!94;UBERON:0001016!4.79e-29!94;UBERON:0002346!7.42e-25!90;UBERON:0000955!1.76e-23!69;UBERON:0006238!1.76e-23!69;UBERON:0000924!2.29e-23!173;UBERON:0006601!2.29e-23!173;UBERON:0003075!4.60e-23!86;UBERON:0007284!4.60e-23!86;UBERON:0001049!8.96e-23!57;UBERON:0005068!8.96e-23!57;UBERON:0006241!8.96e-23!57;UBERON:0007135!8.96e-23!57;UBERON:0004121!9.09e-22!169;UBERON:0001893!7.03e-21!34;UBERON:0001869!8.50e-21!32;UBERON:0002616!1.17e-20!59;UBERON:0002020!2.52e-20!34;UBERON:0003528!2.52e-20!34;UBERON:0002791!3.81e-20!33;UBERON:0002780!4.33e-20!41;UBERON:0001890!4.33e-20!41;UBERON:0006240!4.33e-20!41;UBERON:0003056!1.81e-19!61;UBERON:0000033!2.09e-19!123;UBERON:0003080!3.99e-19!42;UBERON:0000153!2.63e-18!129;UBERON:0007811!2.63e-18!129;UBERON:0000956!1.27e-16!25;UBERON:0000203!1.27e-16!25;UBERON:0002619!3.06e-16!22;UBERON:0001950!5.92e-15!20;UBERON:0000119!1.52e-12!312;UBERON:0000483!3.36e-12!309;UBERON:0000475!9.87e-12!365;UBERON:0000481!4.44e-11!347;UBERON:0000025!8.65e-10!194;UBERON:0000064!1.10e-09!219;UBERON:0004111!2.07e-08!241;UBERON:0007023!1.17e-07!115;UBERON:0000922!2.82e-07!612;UBERON:0000468!3.41e-07!659;UBERON:0000477!3.60e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.48e-25;32!UBERON:0002619;9.78e-25;22!UBERON:0001893;1.19e-23;34!UBERON:0003528;1.94e-23;34!UBERON:0002020;1.94e-23;34!UBERON:0002791;4.42e-23;32!UBERON:0001950;9.72e-23;20!UBERON:0000956;1.61e-22;25!UBERON:0000203;1.61e-22;25!UBERON:0002780;2.93e-18;41!UBERON:0001890;2.93e-18;41!UBERON:0000073;7.11e-16;53!UBERON:0002616;7.11e-16;53!UBERON:0001017;2.14e-15;75!UBERON:0000955;4.96e-14;68!UBERON:0001016;1.17e-12;83!UBERON:0001871;1.03e-08;6!UBERON:0000200;1.29e-07;6!UBERON:0001872;5.78e-07;5!UBERON:0000349;6.51e-07;5!UBERON:0000922;8.20e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001869;7.48e-25;32!UBERON:0002619;9.78e-25;22!UBERON:0001893;1.19e-23;34!UBERON:0003528;1.94e-23;34!UBERON:0002020;1.94e-23;34!UBERON:0002791;4.42e-23;32!UBERON:0001950;9.72e-23;20!UBERON:0000956;1.61e-22;25!UBERON:0000203;1.61e-22;25!UBERON:0002780;2.93e-18;41!UBERON:0001890;2.93e-18;41!UBERON:0000073;7.11e-16;53!UBERON:0002616;7.11e-16;53!UBERON:0001017;2.14e-15;75!UBERON:0000955;4.96e-14;68!UBERON:0001016;1.17e-12;83!UBERON:0001871;1.03e-08;6!UBERON:0000200;1.29e-07;6!UBERON:0001872;5.78e-07;5!UBERON:0000349;6.51e-07;5!UBERON:0000922;8.20e-07;49 | ||
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| ||
|short_description=p2@EFNB3 | |short_description=p2@EFNB3 | ||
}} | }} |
Latest revision as of 20:14, 17 September 2015
Short description: | p2@EFNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EFNB3_5end |
Coexpression cluster: | C3689_brain_amygdala_temporal_duodenum_insula_putamen_Mesenchymal |
Association with transcript: | 20bp_to_ENST00000226091, NM_001406, uc002gis.2_5end |
EntrezGene: | EFNB3 |
HGNC: | 3228 |
UniProt: | Q15768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.53e-10 | 59 |
neuronal stem cell | 2.30e-09 | 8 |
neural cell | 8.49e-08 | 25 |
ectodermal cell | 1.24e-07 | 72 |
neuron | 1.43e-07 | 6 |
neuroblast | 1.43e-07 | 6 |
electrically signaling cell | 1.43e-07 | 6 |