FFCP PHASE1:Hg19::chr20:48807430..48807439,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:48807430..48807439,+
|short_description=p8@CEBPB
|description=CAGE_peak_8_at_CEBPB_5end
|association_with_transcript=54bp_to_ENST00000303004,uc002xvh.2,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1051 | |EntrezGene=1051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1834 | |HGNC=1834 | ||
|TSSclassifier=strong | |||
|UniProt=P17676 | |UniProt=P17676 | ||
|association_with_transcript=54bp_to_ENST00000303004,uc002xvh.2,uc002xvi.1_5end | |||
|cluster_id=chr20:48807430..48807439,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_8_at_CEBPB_5end | |||
|id=chr20:48807430..48807439,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.26e-28!76;CL:0002057!7.89e-28!42;CL:0000860!1.11e-27!45;CL:0002194!1.87e-24!63;CL:0000576!1.87e-24!63;CL:0000040!1.87e-24!63;CL:0000559!1.87e-24!63;CL:0002009!7.80e-23!65;CL:0000557!7.07e-22!71;CL:0000839!1.02e-21!70;CL:0000763!2.37e-12!112;CL:0000049!2.37e-12!112;CL:0000063!1.42e-09!578;CL:0000738!4.64e-09!140;CL:0002087!5.10e-08!119;CL:0002393!2.11e-07!9;CL:0002397!2.11e-07!9;CL:0000094!6.56e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.61e-28;33!CL:0002057;4.61e-28;33!CL:0000473;5.09e-25;39!CL:0000234;5.09e-25;39!CL:0000576;2.95e-21;48!CL:0000766;2.73e-18;69!CL:0000094;2.85e-09;8!CL:0000763;2.31e-07;100!CL:0002393;2.69e-07;6!CL:0002397;2.69e-07;6!CL:0000081;4.26e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.07e-41,48;CL:0000234,8.07e-41,48;CL:0000860,3.53e-39,42;CL:0002057,3.53e-39,42;CL:0000766,2.25e-37,72;CL:0002194,5.57e-32,59;CL:0000576,5.57e-32,59;CL:0000040,5.57e-32,59;CL:0000559,5.57e-32,59;CL:0002009,3.30e-30,61;CL:0000557,1.14e-28,67;CL:0000839,2.26e-28,66;CL:0000763,6.82e-19,108;CL:0000049,6.82e-19,108;CL:0000738,2.20e-15,136;CL:0002087,1.55e-13,115;CL:0002031,6.58e-11,120;CL:0002393,6.46e-10,9;CL:0002397,6.46e-10,9;CL:0000037,1.83e-09,168;CL:0000094,3.24e-09,8;CL:0002032,5.01e-09,161;CL:0000837,5.01e-09,161;CL:0000988,5.73e-09,177;CL:0000134,2.57e-07,354;CL:0002320,3.54e-07,361;CL:0000081,6.38e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-28;42!CL:0000049;4.42e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-18!80;UBERON:0001474!1.52e-18!86;UBERON:0002405!1.60e-16!115;UBERON:0002390!2.33e-16!102;UBERON:0003061!2.33e-16!102;UBERON:0002193!9.86e-14!112;UBERON:0004765!1.21e-13!101;UBERON:0001434!1.21e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-25,76;UBERON:0001474,4.57e-25,82;UBERON:0002390,9.07e-22,98;UBERON:0003061,9.07e-22,98;UBERON:0004765,1.14e-21,90;UBERON:0002405,2.76e-19,93;UBERON:0001434,9.71e-19,100;UBERON:0002193,1.99e-18,108;UBERON:0002204,3.67e-08,167;UBERON:0002384,8.49e-07,371 | |||
|phase1_expression=0.908391896352783,1.2846031433459,2.39622486963151,2.00146596706261,0.446961094427288,1.74467704820074,5.06599756336621,0,0.783556884599516,1.22866968250754,2.09340350391728,0.436882744260345,0.527533956456907,0.37129905888014,0,1.34465029290355,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,14.9478425202584,5.37361157336098,15.7912445782398,0,0.30120591877825,0.739508020333575,0.619737604642413,0,0.293600439334847,10.5259127621057,14.2386557703801,15.4077718208255,1.79132379391939,0.647787332037959,0.515151135268373,5.81592955118259,6.42389104270976,3.39617685662943,11.1565937714729,13.9797081927421,8.981484755958,11.2200033005639,8.45330331546032,9.22280696565482,8.61864201841546,18.0735711403471,16.251178391321,9.03563229804502,7.91427835167753,6.06753408001728,7.65209730927256,6.73950956859797,10.2293940127847,7.25672860410775,9.3747919082167,11.5080682643827,13.930043454172,12.4824749432051,7.4738669879469,8.54245461872927,10.9511412868242,9.33912032232002,4.84319602106695,9.20694089968912,8.54448446090388,15.6328911870837,14.2444880976579,12.3698600849942,19.4328531883437,15.9187506411997,11.8936934155839,9.9754460309437,10.7415005687509,12.2384983022305,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0.786839080455332,0.786021525498329,0.822405995998037,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.741432815810302,0,0,0,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,1.61285394579786,1.06976078313403,0.724122019413995,2.43806866313962,1.34140171940727,0.511450247374121,0,0.50133791063589,0.724232594804119,0,0.973269740605272,0.0945348171640679,0.665188192387692,0.351339142772504,0.654895377488563,0.728590576585084,0.741568885568859,0.324547393654683,0.348259474598534,1.32957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,28.9916918359339,34.9002237733493,0.872188104285069,0,0.25326102332916,0.794455084879313,0,0,0,0,0.98667019366864,0.311211035399766,0.134710672069688,0,0.151357427644931,1.72852777344,1.87457145467037,0.624320153660641,0,0.597794722207204,0.352303495931295,0.809364721840658,0.421352420106746,0.408308342509787,0.368502951935304,1.65321249881225,1.18800285728205,0.741800787835671,0.910161361938026,2.15585442544872,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,1.20190447125277,0.340296549480063,0,0.427114777637135,0,0.900273288253207,0.309157587715317,0.772921620136887,0.744467425326359,0.506328996723799,0.194874010322397,0.504867548488229,0.552299391853796,0,0.355009592516614,0.201504196455281,0.169560592310488,0.57978255948989,0,0.860413786167011,0.243947412259191,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0,0,1.92972281457866,0,0.464367928031979,0,0.946454400318751,0,0,0.220587945464788,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0.38474715694639,0,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0.982827216677626,1.18157981336281,0.441463099414651,0.983907508344908,0.514703430895577,0.219500570817251,1.1240175325762,0.402115889646523,0.740707561268237,2.28065813717227,0,1.44331342025273,0.231860809950154,0.352226082707465,0.288732895522148,0,0.190254152234598,0,0,0.492434012174795,1.40402559083543,2.52672975890838,0,0.335964256397719,0.283550194484773,1.16426079513703,1.74380363108377,1.53353071666084,0,0.264145302039678,1.65862492432618,1.00883967391873,0.6312121671319,0.253991577168676,1.52795370223311,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.224262168690721,0,0.36669142910475,0.258543431515556,0,2.535908257668,1.06375246633948,2.08014873822732,0.514414748524284,0,0,1.14382394926518,2.71310802695722,0,1.62868092146868,1.77695974371273,0,3.61727252471503,1.74306691720059,1.3996218765488,2.43247561282381,2.00902836572851,4.21667878966063,0.958499421966331,1.14861935834114,1.42636905040718,0.289562613335158,1.43833425785268,0.716243852959582,1.79336230389644,1.18218456121156,1.2937654491571,2.18183161675572,0,1.30139853857622,0,0,0,20.9721966705211,26.9245313283622,12.8468809165171,0.49076596687656,1.50051156317903,0.542530047399471,0.415941723061614,1.96271887676878,0.473107245101804,0.585707074963566,0.300946099727719,0,0,0,0,0.60818530127658,1.56640925970192,0.343143423810856,6.6165768359324,9.92285323765637,5.97674323699288,0.303127571446259,0,1.20956117331872,1.48864684691266,1.2276957863045,0.841980283299221,2.05022638809122,0,0.804269605718038,1.48418066444991,0.771048469013278,0.532685175939381,0.574890092096664,0,0.464841513839837,0.483437798366489,0.200506470303285,1.74953878978203,0.918515585316854,1.0925470080403,1.04899531967539,0.902399225814824,0.616122696835318,0,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,2.49322802678617,0,0,0.261435451024901,0.769350375349168,0,0.976135183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| ||
|short_description=p8@CEBPB | |||
}} | }} |
Latest revision as of 20:48, 16 September 2015
Short description: | p8@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CEBPB_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 54bp_to_ENST00000303004, uc002xvh.2, uc002xvi.1_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | P17676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.07e-41 | 48 |
phagocyte | 8.07e-41 | 48 |
classical monocyte | 3.53e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-39 | 42 |
myeloid leukocyte | 2.25e-37 | 72 |
monopoietic cell | 5.57e-32 | 59 |
monocyte | 5.57e-32 | 59 |
monoblast | 5.57e-32 | 59 |
promonocyte | 5.57e-32 | 59 |
macrophage dendritic cell progenitor | 3.30e-30 | 61 |
granulocyte monocyte progenitor cell | 1.14e-28 | 67 |
myeloid lineage restricted progenitor cell | 2.26e-28 | 66 |
myeloid cell | 6.82e-19 | 108 |
common myeloid progenitor | 6.82e-19 | 108 |
leukocyte | 2.20e-15 | 136 |
nongranular leukocyte | 1.55e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.58e-11 | 120 |
intermediate monocyte | 6.46e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.46e-10 | 9 |
hematopoietic stem cell | 1.83e-09 | 168 |
granulocyte | 3.24e-09 | 8 |
hematopoietic oligopotent progenitor cell | 5.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.01e-09 | 161 |
hematopoietic cell | 5.73e-09 | 177 |
mesenchymal cell | 2.57e-07 | 354 |
connective tissue cell | 3.54e-07 | 361 |
blood cell | 6.38e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-25 | 76 |
bone element | 4.57e-25 | 82 |
hematopoietic system | 9.07e-22 | 98 |
blood island | 9.07e-22 | 98 |
skeletal element | 1.14e-21 | 90 |
immune system | 2.76e-19 | 93 |
skeletal system | 9.71e-19 | 100 |
hemolymphoid system | 1.99e-18 | 108 |
musculoskeletal system | 3.67e-08 | 167 |
connective tissue | 8.49e-07 | 371 |