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FFCP PHASE1:Hg19::chr20:48532046..48532073,-: Difference between revisions

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(Created page with "{{FFCP |id=chr20:48532046..48532073,- |short_description=p2@SPATA2 |description=CAGE_peak_2_at_SPATA2_5end |association_with_transcript=-1bp_to_ENST00000289431_5end |Entr...")
 
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{{FFCP
{{FFCP
|id=chr20:48532046..48532073,-
|DHSsupport=supported 
|short_description=p2@SPATA2
|DPIdataset=robust
|description=CAGE_peak_2_at_SPATA2_5end
|association_with_transcript=-1bp_to_ENST00000289431_5end
|EntrezGene=9825
|EntrezGene=9825
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=14681
|HGNC=14681
|TSSclassifier=strong
|UniProt=Q9UM82
|UniProt=Q9UM82
|association_with_transcript=-1bp_to_ENST00000289431_5end
|cluster_id=chr20:48532046..48532073,-
|description=CAGE_peak_2_at_SPATA2_5end
|id=chr20:48532046..48532073,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!4.48e-28!115;UBERON:0001049!6.37e-20!57;UBERON:0005068!6.37e-20!57;UBERON:0006241!6.37e-20!57;UBERON:0007135!6.37e-20!57;UBERON:0002616!2.44e-16!59;UBERON:0001893!3.27e-16!34;UBERON:0003080!5.58e-16!42;UBERON:0002020!7.98e-16!34;UBERON:0003528!7.98e-16!34;UBERON:0002780!8.69e-16!41;UBERON:0001890!8.69e-16!41;UBERON:0006240!8.69e-16!41;UBERON:0002791!1.14e-15!33;UBERON:0001869!2.56e-15!32;UBERON:0000955!1.76e-14!69;UBERON:0006238!1.76e-14!69;UBERON:0002619!2.56e-14!22;UBERON:0001017!8.04e-14!82;UBERON:0001950!2.65e-13!20;UBERON:0005743!4.84e-13!86;UBERON:0002346!3.74e-12!90;UBERON:0003075!7.36e-12!86;UBERON:0007284!7.36e-12!86;UBERON:0000073!1.40e-11!94;UBERON:0001016!1.40e-11!94;UBERON:0000956!2.48e-11!25;UBERON:0000203!2.48e-11!25;UBERON:0003056!3.46e-09!61;UBERON:0000153!1.63e-07!129;UBERON:0007811!1.63e-07!129;UBERON:0000924!4.43e-07!173;UBERON:0006601!4.43e-07!173;UBERON:0004121!8.72e-07!169
|ontology_enrichment_uberon_v019=UBERON:0002619;1.64e-14;22!UBERON:0001869;4.94e-14;32!UBERON:0001893;5.05e-14;34!UBERON:0002791;5.40e-14;32!UBERON:0003528;8.17e-14;34!UBERON:0002020;8.17e-14;34!UBERON:0001950;1.88e-13;20!UBERON:0002780;7.25e-12;41!UBERON:0001890;7.25e-12;41!UBERON:0000956;1.28e-11;25!UBERON:0000203;1.28e-11;25!UBERON:0000073;9.34e-11;53!UBERON:0002616;9.34e-11;53!UBERON:0000955;9.27e-08;68!UBERON:0007023;9.98e-08;114
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.81e-27,114;UBERON:0001049,1.02e-19,56;UBERON:0005068,1.02e-19,56;UBERON:0006241,1.02e-19,56;UBERON:0007135,1.02e-19,56;UBERON:0000073,4.94e-19,53;UBERON:0002616,4.94e-19,53;UBERON:0001893,3.27e-16,34;UBERON:0003528,7.98e-16,34;UBERON:0002020,7.98e-16,34;UBERON:0002780,8.69e-16,41;UBERON:0001890,8.69e-16,41;UBERON:0003080,8.69e-16,41;UBERON:0006240,8.69e-16,41;UBERON:0001869,2.56e-15,32;UBERON:0002791,3.37e-15,32;UBERON:0002619,2.56e-14,22;UBERON:0000955,2.88e-14,68;UBERON:0006238,2.88e-14,68;UBERON:0001017,1.31e-13,81;UBERON:0001950,2.65e-13,20;UBERON:0001016,5.12e-12,89;UBERON:0002346,1.89e-11,86;UBERON:0000956,2.48e-11,25;UBERON:0000203,2.48e-11,25;UBERON:0003075,3.69e-11,82;UBERON:0007284,3.69e-11,82;UBERON:0010371,1.30e-09,104;UBERON:0003056,5.09e-09,61;UBERON:0010314,7.01e-07,132;UBERON:0004121,7.53e-07,171;UBERON:0000924,7.53e-07,171;UBERON:0006601,7.53e-07,171
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|short_description=p2@SPATA2
}}
}}

Latest revision as of 20:19, 16 September 2015

Short description:p2@SPATA2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_SPATA2_5end
Coexpression cluster:NA
Association with transcript: -1bp_to_ENST00000289431_5end
EntrezGene:SPATA2
HGNC: 14681
UniProt: Q9UM82
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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