FFCP PHASE1:Hg19::chr19:13051092..13051103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-51bp_to_AK130190_5end | |association_with_transcript=-51bp_to_AK130190_5end | ||
|cluster_id=chr19:13051092..13051103,+ | |||
|coexpression_cluster_id=C603 | |coexpression_cluster_id=C603 | ||
|description=CAGE_peak_17_at_CALR_5end | |description=CAGE_peak_17_at_CALR_5end | ||
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|ontology_enrichment_celltype=CL:0000012!2.23e-18!682;CL:0000548!3.11e-18!679;CL:0000004!3.11e-18!679;CL:0000255!3.11e-18!679;CL:0000144!1.74e-17!625;CL:0002371!2.95e-17!591;CL:0000055!1.67e-13!180;CL:0000003!5.09e-12!722;CL:0000034!2.53e-10!444;CL:0000723!4.97e-10!436;CL:0000048!6.90e-10!430;CL:0002321!6.59e-09!248;CL:0000220!7.46e-09!246;CL:0000222!3.47e-08!119;CL:0000183!4.37e-08!59;CL:0000063!2.09e-07!578;CL:0000680!2.52e-07!57;CL:0000056!2.52e-07!57;CL:0000355!2.52e-07!57;CL:0000393!2.57e-07!60;CL:0000211!2.57e-07!60;CL:0000192!3.36e-07!42;CL:0000514!3.36e-07!42;CL:0000359!7.21e-07!32;CL:0000187!8.11e-07!54 | |ontology_enrichment_celltype=CL:0000012!2.23e-18!682;CL:0000548!3.11e-18!679;CL:0000004!3.11e-18!679;CL:0000255!3.11e-18!679;CL:0000144!1.74e-17!625;CL:0002371!2.95e-17!591;CL:0000055!1.67e-13!180;CL:0000003!5.09e-12!722;CL:0000034!2.53e-10!444;CL:0000723!4.97e-10!436;CL:0000048!6.90e-10!430;CL:0002321!6.59e-09!248;CL:0000220!7.46e-09!246;CL:0000222!3.47e-08!119;CL:0000183!4.37e-08!59;CL:0000063!2.09e-07!578;CL:0000680!2.52e-07!57;CL:0000056!2.52e-07!57;CL:0000355!2.52e-07!57;CL:0000393!2.57e-07!60;CL:0000211!2.57e-07!60;CL:0000192!3.36e-07!42;CL:0000514!3.36e-07!42;CL:0000359!7.21e-07!32;CL:0000187!8.11e-07!54 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.40e-10,441;CL:0000723,5.93e-10,433;CL:0000048,1.12e-09,427;CL:0002321,3.04e-07,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.17e-08!79;UBERON:0007798!2.17e-08!79;UBERON:0005256!4.51e-08!143;UBERON:0000914!2.90e-07!83;UBERON:0002329!2.90e-07!83;UBERON:0003077!2.90e-07!83;UBERON:0003059!2.90e-07!83;UBERON:0007282!2.90e-07!83;UBERON:0009618!2.90e-07!83;UBERON:0007285!2.90e-07!83;UBERON:0001637!4.06e-07!42;UBERON:0003509!4.06e-07!42;UBERON:0004572!4.06e-07!42;UBERON:0004290!5.84e-07!70;UBERON:0003914!9.91e-07!118 | |ontology_enrichment_uberon=UBERON:0002049!2.17e-08!79;UBERON:0007798!2.17e-08!79;UBERON:0005256!4.51e-08!143;UBERON:0000914!2.90e-07!83;UBERON:0002329!2.90e-07!83;UBERON:0003077!2.90e-07!83;UBERON:0003059!2.90e-07!83;UBERON:0007282!2.90e-07!83;UBERON:0009618!2.90e-07!83;UBERON:0007285!2.90e-07!83;UBERON:0001637!4.06e-07!42;UBERON:0003509!4.06e-07!42;UBERON:0004572!4.06e-07!42;UBERON:0004290!5.84e-07!70;UBERON:0003914!9.91e-07!118 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.95e-08,78;UBERON:0005256,1.56e-07,122 | |||
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| ||
|short_description=p17@CALR | |short_description=p17@CALR | ||
}} | }} |
Latest revision as of 22:10, 15 September 2015
Short description: | p17@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CALR_5end |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | -51bp_to_AK130190_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.40e-10 | 441 |
somatic stem cell | 5.93e-10 | 433 |
multi fate stem cell | 1.12e-09 | 427 |
embryonic cell | 3.04e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.95e-08 | 78 |
trunk mesenchyme | 1.56e-07 | 122 |