FFCP PHASE1:Hg19::chr1:104068312..104068352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55599 | |EntrezGene=55599 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18666 | |HGNC=18666 | ||
|TSSclassifier=strong | |||
|UniProt=A8K1C9 | |UniProt=A8K1C9 | ||
|association_with_transcript=0bp_to_ENST00000524631,ENST00000531883,ENST00000533099_5end | |association_with_transcript=0bp_to_ENST00000524631,ENST00000531883,ENST00000533099_5end | ||
|cluster_id=chr1:104068312..104068352,+ | |||
|description=CAGE_peak_1_at_RNPC3_5end | |description=CAGE_peak_1_at_RNPC3_5end | ||
|id=chr1:104068312..104068352,+ | |id=chr1:104068312..104068352,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0000738!2.97e-23!140;CL:0002032!9.18e-23!165;CL:0000837!9.18e-23!165;CL:0000988!1.36e-22!182;CL:0002031!8.46e-20!124;CL:0002087!2.04e-19!119;CL:0000763!2.10e-14!112;CL:0000049!2.10e-14!112;CL:0000766!4.24e-14!76;CL:0000557!2.30e-12!71;CL:0002057!2.70e-12!42;CL:0000860!4.47e-12!45;CL:0000839!1.18e-11!70;CL:0002009!4.46e-11!65;CL:0002194!9.00e-11!63;CL:0000576!9.00e-11!63;CL:0000040!9.00e-11!63;CL:0000559!9.00e-11!63;CL:0000838!2.65e-08!52;CL:0000542!3.00e-08!53;CL:0000051!3.00e-08!53 | |ontology_enrichment_celltype=CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0000738!2.97e-23!140;CL:0002032!9.18e-23!165;CL:0000837!9.18e-23!165;CL:0000988!1.36e-22!182;CL:0002031!8.46e-20!124;CL:0002087!2.04e-19!119;CL:0000763!2.10e-14!112;CL:0000049!2.10e-14!112;CL:0000766!4.24e-14!76;CL:0000557!2.30e-12!71;CL:0002057!2.70e-12!42;CL:0000860!4.47e-12!45;CL:0000839!1.18e-11!70;CL:0002009!4.46e-11!65;CL:0002194!9.00e-11!63;CL:0000576!9.00e-11!63;CL:0000040!9.00e-11!63;CL:0000559!9.00e-11!63;CL:0000838!2.65e-08!52;CL:0000542!3.00e-08!53;CL:0000051!3.00e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.17e-08;48!CL:0000860;1.42e-08;33!CL:0002057;1.42e-08;33!CL:0000766;2.42e-07;69!CL:0000473;3.63e-07;39!CL:0000234;3.63e-07;39!CL:0002087;4.11e-07;104 | |ontology_enrichment_celltype_v019=CL:0000576;1.17e-08;48!CL:0000860;1.42e-08;33!CL:0002057;1.42e-08;33!CL:0000766;2.42e-07;69!CL:0000473;3.63e-07;39!CL:0000234;3.63e-07;39!CL:0002087;4.11e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.86e-25,168;CL:0000738,6.11e-24,136;CL:0000988,1.09e-23,177;CL:0002032,2.50e-23,161;CL:0000837,2.50e-23,161;CL:0002031,1.80e-20,120;CL:0002087,4.19e-20,115;CL:0000763,5.91e-15,108;CL:0000049,5.91e-15,108;CL:0000766,6.80e-15,72;CL:0000557,4.14e-13,67;CL:0000839,2.30e-12,66;CL:0000860,2.69e-12,42;CL:0002057,2.69e-12,42;CL:0002009,8.35e-12,61;CL:0000473,9.57e-12,48;CL:0000234,9.57e-12,48;CL:0002194,1.68e-11,59;CL:0000576,1.68e-11,59;CL:0000040,1.68e-11,59;CL:0000559,1.68e-11,59;CL:0000838,2.65e-08,52;CL:0000542,3.00e-08,53;CL:0000051,3.00e-08,53 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.92e-10;82!CL:0002057;4.02e-09;42 | |ontology_enrichment_development_v019=UBERON:0006601;3.92e-10;82!CL:0002057;4.02e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-36!115;UBERON:0001049!1.70e-25!57;UBERON:0005068!1.70e-25!57;UBERON:0006241!1.70e-25!57;UBERON:0007135!1.70e-25!57;UBERON:0001017!2.59e-23!82;UBERON:0000073!5.10e-23!94;UBERON:0001016!5.10e-23!94;UBERON:0005743!4.51e-22!86;UBERON:0002780!4.61e-22!41;UBERON:0001890!4.61e-22!41;UBERON:0006240!4.61e-22!41;UBERON:0003080!5.80e-22!42;UBERON:0002616!1.14e-21!59;UBERON:0000955!2.57e-21!69;UBERON:0006238!2.57e-21!69;UBERON:0002020!6.36e-18!34;UBERON:0003528!6.36e-18!34;UBERON:0001893!8.85e-18!34;UBERON:0002791!3.04e-17!33;UBERON:0001869!1.10e-16!32;UBERON:0002619!3.15e-14!22;UBERON:0002346!1.51e-13!90;UBERON:0003075!2.01e-13!86;UBERON:0007284!2.01e-13!86;UBERON:0002390!2.91e-13!102;UBERON:0003061!2.91e-13!102;UBERON:0001950!6.19e-13!20;UBERON:0000956!2.33e-12!25;UBERON:0000203!2.33e-12!25;UBERON:0002193!5.40e-11!112;UBERON:0003056!3.63e-10!61;UBERON:0002371!2.98e-09!80;UBERON:0001474!5.66e-09!86;UBERON:0000153!6.23e-09!129;UBERON:0007811!6.23e-09!129;UBERON:0000924!5.06e-08!173;UBERON:0006601!5.06e-08!173;UBERON:0000033!6.16e-08!123;UBERON:0004121!8.41e-08!169;UBERON:0002420!2.69e-07!9;UBERON:0007245!2.69e-07!9;UBERON:0010009!2.69e-07!9;UBERON:0010011!2.69e-07!9;UBERON:0000454!2.69e-07!9;UBERON:0002308!3.50e-07!9;UBERON:0000125!3.50e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.41e-36!115;UBERON:0001049!1.70e-25!57;UBERON:0005068!1.70e-25!57;UBERON:0006241!1.70e-25!57;UBERON:0007135!1.70e-25!57;UBERON:0001017!2.59e-23!82;UBERON:0000073!5.10e-23!94;UBERON:0001016!5.10e-23!94;UBERON:0005743!4.51e-22!86;UBERON:0002780!4.61e-22!41;UBERON:0001890!4.61e-22!41;UBERON:0006240!4.61e-22!41;UBERON:0003080!5.80e-22!42;UBERON:0002616!1.14e-21!59;UBERON:0000955!2.57e-21!69;UBERON:0006238!2.57e-21!69;UBERON:0002020!6.36e-18!34;UBERON:0003528!6.36e-18!34;UBERON:0001893!8.85e-18!34;UBERON:0002791!3.04e-17!33;UBERON:0001869!1.10e-16!32;UBERON:0002619!3.15e-14!22;UBERON:0002346!1.51e-13!90;UBERON:0003075!2.01e-13!86;UBERON:0007284!2.01e-13!86;UBERON:0002390!2.91e-13!102;UBERON:0003061!2.91e-13!102;UBERON:0001950!6.19e-13!20;UBERON:0000956!2.33e-12!25;UBERON:0000203!2.33e-12!25;UBERON:0002193!5.40e-11!112;UBERON:0003056!3.63e-10!61;UBERON:0002371!2.98e-09!80;UBERON:0001474!5.66e-09!86;UBERON:0000153!6.23e-09!129;UBERON:0007811!6.23e-09!129;UBERON:0000924!5.06e-08!173;UBERON:0006601!5.06e-08!173;UBERON:0000033!6.16e-08!123;UBERON:0004121!8.41e-08!169;UBERON:0002420!2.69e-07!9;UBERON:0007245!2.69e-07!9;UBERON:0010009!2.69e-07!9;UBERON:0010011!2.69e-07!9;UBERON:0000454!2.69e-07!9;UBERON:0002308!3.50e-07!9;UBERON:0000125!3.50e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.26e-16;41!UBERON:0001890;4.26e-16;41!UBERON:0003528;2.79e-15;34!UBERON:0002020;2.79e-15;34!UBERON:0001893;2.95e-15;34!UBERON:0002791;4.31e-15;32!UBERON:0001869;4.73e-15;32!UBERON:0000073;1.92e-14;53!UBERON:0002616;1.92e-14;53!UBERON:0002619;3.02e-14;22!UBERON:0001950;5.94e-13;20!UBERON:0000956;2.25e-12;25!UBERON:0000203;2.25e-12;25!UBERON:0001017;1.96e-10;75!UBERON:0007023;3.46e-10;114!UBERON:0000955;3.74e-10;68!UBERON:0001016;4.32e-10;83!UBERON:0002420;2.61e-07;9!UBERON:0007245;2.61e-07;9!UBERON:0010009;2.61e-07;9!UBERON:0010011;2.61e-07;9!UBERON:0000454;2.61e-07;9!UBERON:0000125;3.37e-07;9!UBERON:0002308;3.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.26e-16;41!UBERON:0001890;4.26e-16;41!UBERON:0003528;2.79e-15;34!UBERON:0002020;2.79e-15;34!UBERON:0001893;2.95e-15;34!UBERON:0002791;4.31e-15;32!UBERON:0001869;4.73e-15;32!UBERON:0000073;1.92e-14;53!UBERON:0002616;1.92e-14;53!UBERON:0002619;3.02e-14;22!UBERON:0001950;5.94e-13;20!UBERON:0000956;2.25e-12;25!UBERON:0000203;2.25e-12;25!UBERON:0001017;1.96e-10;75!UBERON:0007023;3.46e-10;114!UBERON:0000955;3.74e-10;68!UBERON:0001016;4.32e-10;83!UBERON:0002420;2.61e-07;9!UBERON:0007245;2.61e-07;9!UBERON:0010009;2.61e-07;9!UBERON:0010011;2.61e-07;9!UBERON:0000454;2.61e-07;9!UBERON:0000125;3.37e-07;9!UBERON:0002308;3.37e-07;9 | ||
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| ||
|short_description=p1@RNPC3 | |short_description=p1@RNPC3 | ||
}} | }} |
Latest revision as of 06:35, 25 September 2015
Short description: | p1@RNPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNPC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524631, ENST00000531883, ENST00000533099_5end |
EntrezGene: | RNPC3 |
HGNC: | 18666 |
UniProt: | A8K1C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.86e-25 | 168 |
leukocyte | 6.11e-24 | 136 |
hematopoietic cell | 1.09e-23 | 177 |
hematopoietic oligopotent progenitor cell | 2.50e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-23 | 161 |
hematopoietic lineage restricted progenitor cell | 1.80e-20 | 120 |
nongranular leukocyte | 4.19e-20 | 115 |
myeloid cell | 5.91e-15 | 108 |
common myeloid progenitor | 5.91e-15 | 108 |
myeloid leukocyte | 6.80e-15 | 72 |
granulocyte monocyte progenitor cell | 4.14e-13 | 67 |
myeloid lineage restricted progenitor cell | 2.30e-12 | 66 |
classical monocyte | 2.69e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-12 | 42 |
macrophage dendritic cell progenitor | 8.35e-12 | 61 |
defensive cell | 9.57e-12 | 48 |
phagocyte | 9.57e-12 | 48 |
monopoietic cell | 1.68e-11 | 59 |
monocyte | 1.68e-11 | 59 |
monoblast | 1.68e-11 | 59 |
promonocyte | 1.68e-11 | 59 |
lymphoid lineage restricted progenitor cell | 2.65e-08 | 52 |
lymphocyte | 3.00e-08 | 53 |
common lymphoid progenitor | 3.00e-08 | 53 |