FFCP PHASE1:Hg19::chr20:464328..464345,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:464328..464345,-
|short_description=p@chr20:464328..464345,-
|description=CAGE_peak_at_chr20:464328..464345,-
|association_with_transcript=NA
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:464328..464345,- | |||
|description=CAGE_peak_at_chr20:464328..464345,- | |||
|id=chr20:464328..464345,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;7.07e-11;3!CL:0002231;7.07e-11;3!CL:0000306;2.26e-08;4!CL:0002222;2.26e-08;4!CL:1000306;2.26e-08;4!CL:0002547;2.26e-08;4!CL:0002224;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.73e-11,3;CL:0002231,7.42e-11,3;CL:0000306,2.11e-08,4;CL:0002222,2.11e-08,4;CL:0002224,2.11e-08,4;CL:1000306,2.61e-08,4;CL:0002547,2.61e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.90e-11;3!DOID:127;9.90e-11;3!DOID:0060072;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.09e-10,3;DOID:127,1.09e-10,3;DOID:0060072,2.43e-08,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.37e-29;1!UBERON:0006518;2.37e-29;1!UBERON:0008949;2.37e-29;1!UBERON:0000101;2.37e-29;1!UBERON:0002167;2.37e-29;1!UBERON:0010077;2.26e-08;4!UBERON:0005389;2.26e-08;4!UBERON:0000484;2.26e-08;4!UBERON:0004797;2.26e-08;4!UBERON:0000415;2.26e-08;4!UBERON:0007240;2.26e-08;4!UBERON:0005742;2.26e-08;4!UBERON:0005734;2.26e-08;4!UBERON:0000965;2.26e-08;4!UBERON:0001803;2.26e-08;4!UBERON:0004664;2.26e-08;4!UBERON:0004663;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.33e-29,1;UBERON:0006518,1.33e-29,1;UBERON:0008949,1.33e-29,1;UBERON:0000101,1.33e-29,1;UBERON:0002167,1.33e-29,1;UBERON:0010077,2.11e-08,4;UBERON:0005389,2.11e-08,4;UBERON:0000484,2.11e-08,4;UBERON:0002546,2.11e-08,4;UBERON:0000965,2.11e-08,4;UBERON:0001803,2.11e-08,4;UBERON:0003073,2.11e-08,4;UBERON:0005426,2.11e-08,4;UBERON:0000415,2.61e-08,4;UBERON:0007240,2.61e-08,4;UBERON:0005742,2.61e-08,4;UBERON:0005734,2.61e-08,4;UBERON:0004664,2.61e-08,4;UBERON:0004663,2.61e-08,4 | |||
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| ||
|short_description=p@chr20:464328..464345,- | |||
}} | }} |
Latest revision as of 14:50, 28 July 2015
Short description: | p@chr20:464328..464345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:464328..464345, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.73e-11 | 3 |
epithelial cell of prostate | 7.42e-11 | 3 |
crystallin accumulating cell | 2.11e-08 | 4 |
vertebrate lens cell | 2.11e-08 | 4 |
lens epithelial cell | 2.11e-08 | 4 |
fibroblast of tunica adventitia of artery | 2.61e-08 | 4 |
fibroblast of the aortic adventitia | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.33e-29 | 1 |
right lung lobe | 1.33e-29 | 1 |
lower lobe of lung | 1.33e-29 | 1 |
lobe of lung | 1.33e-29 | 1 |
right lung | 1.33e-29 | 1 |
cuboidal epithelium | 2.11e-08 | 4 |
transparent eye structure | 2.11e-08 | 4 |
simple cuboidal epithelium | 2.11e-08 | 4 |
cranial placode | 2.11e-08 | 4 |
lens of camera-type eye | 2.11e-08 | 4 |
epithelium of lens | 2.11e-08 | 4 |
lens placode | 2.11e-08 | 4 |
lens vesicle | 2.11e-08 | 4 |
artery wall | 2.61e-08 | 4 |
tunica adventitia of artery | 2.61e-08 | 4 |
adventitia | 2.61e-08 | 4 |
tunica adventitia of blood vessel | 2.61e-08 | 4 |
aorta tunica adventitia | 2.61e-08 | 4 |
aorta wall | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.09e-10 | 3 |
leiomyoma | 1.09e-10 | 3 |
benign neoplasm | 2.43e-08 | 4 |