FFCP PHASE1:Hg19::chr20:46130827..46130838,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:46130827..46130838,+
|short_description=p8@NCOA3
|description=CAGE_peak_8_at_NCOA3_5end
|association_with_transcript=152bp_to_uc010ghu.1_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8202 | |EntrezGene=8202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7670 | |HGNC=7670 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=152bp_to_uc010ghu.1_5end | |||
|cluster_id=chr20:46130827..46130838,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_8_at_NCOA3_5end | |||
|id=chr20:46130827..46130838,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.76e-13!140;CL:0000037!6.44e-13!172;CL:0000566!6.44e-13!172;CL:0000988!1.01e-12!182;CL:0002032!2.01e-12!165;CL:0000837!2.01e-12!165;CL:0002031!3.83e-11!124;CL:0000838!5.96e-11!52;CL:0000542!1.45e-10!53;CL:0000051!1.45e-10!53;CL:0000625!1.64e-10!11;CL:0000791!3.91e-09!18;CL:0000789!3.91e-09!18;CL:0002420!3.91e-09!18;CL:0002419!3.91e-09!18;CL:0000790!3.91e-09!18;CL:0002087!1.13e-08!119;CL:0000990!1.76e-08!8;CL:0000084!2.43e-08!25;CL:0000827!2.43e-08!25;CL:0000840!2.74e-08!5;CL:0001029!2.74e-08!5;CL:0000451!2.91e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.91e-21;5!CL:0000163;3.74e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.92e-21,5;CL:0002028,4.92e-21,5;CL:0000163,3.74e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@NCOA3 | |||
}} | }} |
Latest revision as of 16:12, 16 September 2015
Short description: | p8@NCOA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NCOA3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 152bp_to_uc010ghu.1_5end |
EntrezGene: | NCOA3 |
HGNC: | 7670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.92e-21 | 5 |
basophil mast progenitor cell | 4.92e-21 | 5 |
endocrine cell | 3.74e-12 | 9 |