FFCP PHASE1:Hg19::chr5:131763102..131763114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:131763102..131763114,- | |||
|coexpression_cluster_id=C654 | |coexpression_cluster_id=C654 | ||
|description=CAGE_peak_at_chr5:131763102..131763114,- | |description=CAGE_peak_at_chr5:131763102..131763114,- | ||
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|ontology_enrichment_celltype=CL:0000738!2.32e-39!140;CL:0000037!6.94e-29!172;CL:0000566!6.94e-29!172;CL:0002087!1.30e-27!119;CL:0000988!2.24e-26!182;CL:0002031!2.34e-24!124;CL:0000838!1.14e-23!52;CL:0000542!4.59e-23!53;CL:0000051!4.59e-23!53;CL:0002032!4.83e-23!165;CL:0000837!4.83e-23!165;CL:0000791!5.04e-15!18;CL:0000789!5.04e-15!18;CL:0002420!5.04e-15!18;CL:0002419!5.04e-15!18;CL:0000790!5.04e-15!18;CL:0000625!1.80e-14!11;CL:0000094!3.95e-14!8;CL:0000084!1.79e-13!25;CL:0000827!1.79e-13!25;CL:0000766!4.49e-10!76;CL:0000081!6.96e-10!11;CL:0002057!2.34e-09!42;CL:0000860!1.85e-08!45;CL:0000775!3.43e-08!3;CL:0000623!4.20e-08!3;CL:0000825!4.20e-08!3;CL:0000767!1.11e-07!3;CL:0000842!1.65e-07!3;CL:0000945!1.83e-07!24;CL:0000826!1.83e-07!24;CL:0002009!7.21e-07!65;CL:0000784!8.24e-07!3 | |ontology_enrichment_celltype=CL:0000738!2.32e-39!140;CL:0000037!6.94e-29!172;CL:0000566!6.94e-29!172;CL:0002087!1.30e-27!119;CL:0000988!2.24e-26!182;CL:0002031!2.34e-24!124;CL:0000838!1.14e-23!52;CL:0000542!4.59e-23!53;CL:0000051!4.59e-23!53;CL:0002032!4.83e-23!165;CL:0000837!4.83e-23!165;CL:0000791!5.04e-15!18;CL:0000789!5.04e-15!18;CL:0002420!5.04e-15!18;CL:0002419!5.04e-15!18;CL:0000790!5.04e-15!18;CL:0000625!1.80e-14!11;CL:0000094!3.95e-14!8;CL:0000084!1.79e-13!25;CL:0000827!1.79e-13!25;CL:0000766!4.49e-10!76;CL:0000081!6.96e-10!11;CL:0002057!2.34e-09!42;CL:0000860!1.85e-08!45;CL:0000775!3.43e-08!3;CL:0000623!4.20e-08!3;CL:0000825!4.20e-08!3;CL:0000767!1.11e-07!3;CL:0000842!1.65e-07!3;CL:0000945!1.83e-07!24;CL:0000826!1.83e-07!24;CL:0002009!7.21e-07!65;CL:0000784!8.24e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.41e-26;8!CL:0000081;6.73e-19;11!CL:0000791;1.18e-18;18!CL:0000789;1.18e-18;18!CL:0002419;1.18e-18;18!CL:0000775;1.18e-18;3!CL:0000623;1.94e-18;3!CL:0000226;3.34e-17;3!CL:0000842;3.34e-17;3!CL:0000084;4.23e-13;25!CL:0000625;1.39e-12;11!CL:0000624;6.81e-09;6!CL:0000767;1.10e-08;3 | |ontology_enrichment_celltype_v019=CL:0000094;3.41e-26;8!CL:0000081;6.73e-19;11!CL:0000791;1.18e-18;18!CL:0000789;1.18e-18;18!CL:0002419;1.18e-18;18!CL:0000775;1.18e-18;3!CL:0000623;1.94e-18;3!CL:0000226;3.34e-17;3!CL:0000842;3.34e-17;3!CL:0000084;4.23e-13;25!CL:0000625;1.39e-12;11!CL:0000624;6.81e-09;6!CL:0000767;1.10e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.08e-26,8;CL:0000081,6.24e-19,11;CL:0000775,1.15e-18,3;CL:0000791,1.26e-18,18;CL:0000789,1.26e-18,18;CL:0002420,1.26e-18,18;CL:0002419,1.26e-18,18;CL:0000790,1.26e-18,18;CL:0000738,1.30e-18,136;CL:0000623,1.94e-18,3;CL:0000825,1.94e-18,3;CL:0000226,6.51e-17,3;CL:0000842,6.51e-17,3;CL:0000037,4.02e-14,168;CL:0000988,3.76e-13,177;CL:0000084,4.42e-13,25;CL:0000827,4.42e-13,25;CL:0000625,1.63e-12,11;CL:0000838,4.66e-11,52;CL:0000542,8.25e-11,53;CL:0000051,8.25e-11,53;CL:0002032,1.01e-09,161;CL:0000837,1.01e-09,161;CL:0000624,6.11e-09,6;CL:0002087,6.55e-09,115;CL:0000767,1.02e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.18e-18;18 | |ontology_enrichment_development_v019=CL:0000790;1.18e-18;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-10!102;UBERON:0003061!2.06e-10!102;UBERON:0002193!1.50e-09!112;UBERON:0000178!2.86e-08!15;UBERON:0000179!2.86e-08!15;UBERON:0000463!2.86e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!2.06e-10!102;UBERON:0003061!2.06e-10!102;UBERON:0002193!1.50e-09!112;UBERON:0000178!2.86e-08!15;UBERON:0000179!2.86e-08!15;UBERON:0000463!2.86e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-12;15!UBERON:0000179;1.04e-12;15!UBERON:0000463;1.04e-12;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-12;15!UBERON:0000179;1.04e-12;15!UBERON:0000463;1.04e-12;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.17e-12,15;UBERON:0000179,1.17e-12,15;UBERON:0000463,1.17e-12,15 | |||
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|short_description=p@chr5:131763102..131763114,- | |short_description=p@chr5:131763102..131763114,- | ||
}} | }} |
Latest revision as of 09:34, 30 July 2015
Short description: | p@chr5:131763102..131763114, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:131763102..131763114, - |
Coexpression cluster: | C654_Eosinophils_Neutrophils_Natural_CD8_CD4_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.08e-26 | 8 |
blood cell | 6.24e-19 | 11 |
neutrophil | 1.15e-18 | 3 |
mature alpha-beta T cell | 1.26e-18 | 18 |
alpha-beta T cell | 1.26e-18 | 18 |
immature T cell | 1.26e-18 | 18 |
mature T cell | 1.26e-18 | 18 |
immature alpha-beta T cell | 1.26e-18 | 18 |
leukocyte | 1.30e-18 | 136 |
natural killer cell | 1.94e-18 | 3 |
pro-NK cell | 1.94e-18 | 3 |
single nucleate cell | 6.51e-17 | 3 |
mononuclear cell | 6.51e-17 | 3 |
hematopoietic stem cell | 4.02e-14 | 168 |
hematopoietic cell | 3.76e-13 | 177 |
T cell | 4.42e-13 | 25 |
pro-T cell | 4.42e-13 | 25 |
CD8-positive, alpha-beta T cell | 1.63e-12 | 11 |
lymphoid lineage restricted progenitor cell | 4.66e-11 | 52 |
lymphocyte | 8.25e-11 | 53 |
common lymphoid progenitor | 8.25e-11 | 53 |
hematopoietic oligopotent progenitor cell | 1.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-09 | 161 |
CD4-positive, alpha-beta T cell | 6.11e-09 | 6 |
nongranular leukocyte | 6.55e-09 | 115 |
basophil | 1.02e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.17e-12 | 15 |
haemolymphatic fluid | 1.17e-12 | 15 |
organism substance | 1.17e-12 | 15 |