FFCP PHASE1:Hg19::chr10:3584597..3584602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3584597..3584602,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_at_chr10:3584597..3584602,+ | |description=CAGE_peak_at_chr10:3584597..3584602,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!3.12e-12!42;CL:0000860!3.39e-11!45;CL:0002009!6.19e-09!65;CL:0002194!5.09e-08!63;CL:0000576!5.09e-08!63;CL:0000040!5.09e-08!63;CL:0000559!5.09e-08!63;CL:0000557!6.94e-08!71;CL:0000839!6.66e-07!70 | |ontology_enrichment_celltype=CL:0002057!3.12e-12!42;CL:0000860!3.39e-11!45;CL:0002009!6.19e-09!65;CL:0002194!5.09e-08!63;CL:0000576!5.09e-08!63;CL:0000040!5.09e-08!63;CL:0000559!5.09e-08!63;CL:0000557!6.94e-08!71;CL:0000839!6.66e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000136;4.07e-15;13!CL:0000540;1.08e-08;6!CL:0000404;1.08e-08;6!CL:0000860;7.92e-08;33!CL:0002057;7.92e-08;33!CL:0001014;4.04e-07;2!CL:0001016;4.04e-07;2 | |ontology_enrichment_celltype_v019=CL:0000136;4.07e-15;13!CL:0000540;1.08e-08;6!CL:0000404;1.08e-08;6!CL:0000860;7.92e-08;33!CL:0002057;7.92e-08;33!CL:0001014;4.04e-07;2!CL:0001016;4.04e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.90e-13,15;CL:0000540,9.27e-09,6;CL:0000031,9.27e-09,6;CL:0000404,9.27e-09,6;CL:0001014,4.17e-07,2;CL:0001016,4.17e-07,2;CL:0000860,7.30e-07,42;CL:0002057,7.30e-07,42;CL:0000047,8.85e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1!CL:0000031;1.08e-08;6!UBERON:0008814;4.04e-07;2!UBERON:0010056;4.04e-07;2!UBERON:0010122;4.04e-07;2 | |ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1!CL:0000031;1.08e-08;6!UBERON:0008814;4.04e-07;2!UBERON:0010056;4.04e-07;2!UBERON:0010122;4.04e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0001897;4.04e-07;2!UBERON:0001873;4.04e-07;2!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0010225;4.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0001897;4.04e-07;2!UBERON:0001873;4.04e-07;2!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0010225;4.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.68e-13,1;UBERON:0001785,7.68e-13,1;UBERON:0002464,7.68e-13,1;UBERON:0004904,7.68e-13,1;UBERON:0001021,7.68e-13,1;UBERON:0003902,7.68e-13,1;UBERON:0005425,7.68e-13,1;UBERON:0001873,3.48e-07,2;UBERON:0010122,3.48e-07,2;UBERON:0001897,3.70e-07,2;UBERON:0010225,3.70e-07,2;UBERON:0003714,4.69e-07,2;UBERON:0005162,4.69e-07,2;UBERON:0000122,4.69e-07,2;UBERON:0002371,8.46e-07,76 | |||
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| ||
|short_description=p@chr10:3584597..3584602,+ | |short_description=p@chr10:3584597..3584602,+ | ||
}} | }} |
Latest revision as of 13:27, 23 July 2015
Short description: | p@chr10:3584597..3584602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3584597..3584602, + |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.90e-13 | 15 |
neuron | 9.27e-09 | 6 |
neuroblast | 9.27e-09 | 6 |
electrically signaling cell | 9.27e-09 | 6 |
CD1a-positive Langerhans cell | 4.17e-07 | 2 |
immature CD1a-positive Langerhans cell | 4.17e-07 | 2 |
classical monocyte | 7.30e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.30e-07 | 42 |
neuronal stem cell | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.68e-13 | 1 |
cranial nerve | 7.68e-13 | 1 |
nerve trunk | 7.68e-13 | 1 |
nerve connecting eye with brain | 7.68e-13 | 1 |
nerve | 7.68e-13 | 1 |
retinal neural layer | 7.68e-13 | 1 |
presumptive neural retina | 7.68e-13 | 1 |
caudate nucleus | 3.48e-07 | 2 |
future caudate nucleus | 3.48e-07 | 2 |
dorsal plus ventral thalamus | 3.70e-07 | 2 |
thalamic complex | 3.70e-07 | 2 |
neural tissue | 4.69e-07 | 2 |
multi cell component structure | 4.69e-07 | 2 |
neuron projection bundle | 4.69e-07 | 2 |
bone marrow | 8.46e-07 | 76 |