FFCP PHASE1:Hg19::chr13:108922478..108922493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10673 | |EntrezGene=10673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |HGNC=11929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_ENST00000479435_5end | |association_with_transcript=-81bp_to_ENST00000479435_5end | ||
|cluster_id=chr13:108922478..108922493,+ | |||
|coexpression_cluster_id=C1186 | |coexpression_cluster_id=C1186 | ||
|description=CAGE_peak_5_at_TNFSF13B_5end | |description=CAGE_peak_5_at_TNFSF13B_5end | ||
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|ontology_enrichment_celltype=CL:0000037!8.95e-64!172;CL:0000566!8.95e-64!172;CL:0000763!2.33e-62!112;CL:0000049!2.33e-62!112;CL:0002032!5.48e-60!165;CL:0000837!5.48e-60!165;CL:0000988!1.54e-57!182;CL:0000738!1.12e-44!140;CL:0000766!3.23e-42!76;CL:0002194!3.30e-40!63;CL:0000576!3.30e-40!63;CL:0000040!3.30e-40!63;CL:0000559!3.30e-40!63;CL:0002009!5.46e-40!65;CL:0002087!2.59e-38!119;CL:0000557!1.12e-37!71;CL:0002057!1.35e-37!42;CL:0000839!4.09e-35!70;CL:0002031!4.85e-34!124;CL:0000860!8.47e-34!45;CL:0000134!4.54e-12!358;CL:0002320!4.03e-11!365;CL:0000219!2.77e-08!390;CL:0002393!5.29e-08!9;CL:0002397!5.29e-08!9;CL:0000451!5.45e-07!10 | |ontology_enrichment_celltype=CL:0000037!8.95e-64!172;CL:0000566!8.95e-64!172;CL:0000763!2.33e-62!112;CL:0000049!2.33e-62!112;CL:0002032!5.48e-60!165;CL:0000837!5.48e-60!165;CL:0000988!1.54e-57!182;CL:0000738!1.12e-44!140;CL:0000766!3.23e-42!76;CL:0002194!3.30e-40!63;CL:0000576!3.30e-40!63;CL:0000040!3.30e-40!63;CL:0000559!3.30e-40!63;CL:0002009!5.46e-40!65;CL:0002087!2.59e-38!119;CL:0000557!1.12e-37!71;CL:0002057!1.35e-37!42;CL:0000839!4.09e-35!70;CL:0002031!4.85e-34!124;CL:0000860!8.47e-34!45;CL:0000134!4.54e-12!358;CL:0002320!4.03e-11!365;CL:0000219!2.77e-08!390;CL:0002393!5.29e-08!9;CL:0002397!5.29e-08!9;CL:0000451!5.45e-07!10 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000763,2.56e-92,108;CL:0000049,2.56e-92,108;CL:0000037,1.58e-73,168;CL:0000473,2.06e-72,48;CL:0000234,2.06e-72,48;CL:0000766,2.31e-71,72;CL:0002032,4.89e-70,161;CL:0000837,4.89e-70,161;CL:0000988,1.60e-68,177;CL:0000860,4.75e-68,42;CL:0002057,4.75e-68,42;CL:0002009,1.18e-67,61;CL:0002194,1.36e-67,59;CL:0000576,1.36e-67,59;CL:0000040,1.36e-67,59;CL:0000559,1.36e-67,59;CL:0000557,4.74e-63,67;CL:0000839,8.61e-59,66;CL:0000738,5.77e-54,136;CL:0002087,4.72e-45,115;CL:0002031,2.66e-39,120;CL:0000134,7.27e-22,354;CL:0002320,5.72e-21,361;CL:0000219,7.93e-18,386;CL:0000034,1.01e-14,441;CL:0000048,5.04e-14,427;CL:0000723,1.67e-13,433;CL:0002393,2.15e-13,9;CL:0002397,2.15e-13,9;CL:0000094,5.04e-11,8;CL:0000990,1.65e-08,8;CL:0000081,1.18e-07,11;CL:0000451,9.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-48;42!CL:0000049;6.59e-27;108 | |ontology_enrichment_development_v019=CL:0002057;1.37e-48;42!CL:0000049;6.59e-27;108 | ||
|ontology_enrichment_disease=DOID:8692!6.58e-19!31;DOID:1240!6.42e-14!39;DOID:2531!1.50e-11!51;DOID:0060083!1.50e-11!51 | |ontology_enrichment_disease=DOID:8692!6.58e-19!31;DOID:1240!6.42e-14!39;DOID:2531!1.50e-11!51;DOID:0060083!1.50e-11!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.60e-15;31!DOID:1240;8.01e-09;39 | |ontology_enrichment_disease_v019=DOID:8692;3.60e-15;31!DOID:1240;8.01e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,3.65e-15,31;DOID:1240,5.32e-11,39;DOID:2531,2.68e-07,51;DOID:0060083,2.68e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.92e-41!102;UBERON:0003061!1.92e-41!102;UBERON:0002193!2.40e-37!112;UBERON:0002371!3.32e-33!80;UBERON:0001474!3.78e-29!86;UBERON:0004765!5.51e-23!101;UBERON:0001434!5.51e-23!101;UBERON:0002405!7.57e-23!115;UBERON:0002384!1.50e-10!375;UBERON:0007023!5.30e-09!115;UBERON:0002204!1.72e-08!167;UBERON:0003081!2.48e-08!216;UBERON:0000178!4.34e-08!15;UBERON:0000179!4.34e-08!15;UBERON:0000463!4.34e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!1.92e-41!102;UBERON:0003061!1.92e-41!102;UBERON:0002193!2.40e-37!112;UBERON:0002371!3.32e-33!80;UBERON:0001474!3.78e-29!86;UBERON:0004765!5.51e-23!101;UBERON:0001434!5.51e-23!101;UBERON:0002405!7.57e-23!115;UBERON:0002384!1.50e-10!375;UBERON:0007023!5.30e-09!115;UBERON:0002204!1.72e-08!167;UBERON:0003081!2.48e-08!216;UBERON:0000178!4.34e-08!15;UBERON:0000179!4.34e-08!15;UBERON:0000463!4.34e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-14;15!UBERON:0000179;1.50e-14;15!UBERON:0000463;1.50e-14;15!UBERON:0002390;2.15e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-14;15!UBERON:0000179;1.50e-14;15!UBERON:0000463;1.50e-14;15!UBERON:0002390;2.15e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-64,98;UBERON:0003061,1.55e-64,98;UBERON:0002193,9.02e-59,108;UBERON:0002371,3.85e-56,76;UBERON:0001474,7.80e-51,82;UBERON:0004765,7.36e-45,90;UBERON:0002405,9.44e-45,93;UBERON:0001434,9.66e-39,100;UBERON:0003081,2.83e-21,203;UBERON:0002384,9.47e-20,371;UBERON:0002204,6.55e-17,167;UBERON:0000178,9.21e-15,15;UBERON:0000179,9.21e-15,15;UBERON:0000463,9.21e-15,15;UBERON:0000926,1.02e-07,315;UBERON:0004120,1.02e-07,315;UBERON:0006603,1.02e-07,315 | |||
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| ||
|short_description=p5@TNFSF13B | |short_description=p5@TNFSF13B | ||
}} | }} |
Latest revision as of 11:09, 16 September 2015
Short description: | p5@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | -81bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.55e-64 | 98 |
blood island | 1.55e-64 | 98 |
hemolymphoid system | 9.02e-59 | 108 |
bone marrow | 3.85e-56 | 76 |
bone element | 7.80e-51 | 82 |
skeletal element | 7.36e-45 | 90 |
immune system | 9.44e-45 | 93 |
skeletal system | 9.66e-39 | 100 |
lateral plate mesoderm | 2.83e-21 | 203 |
connective tissue | 9.47e-20 | 371 |
musculoskeletal system | 6.55e-17 | 167 |
blood | 9.21e-15 | 15 |
haemolymphatic fluid | 9.21e-15 | 15 |
organism substance | 9.21e-15 | 15 |
mesoderm | 1.02e-07 | 315 |
mesoderm-derived structure | 1.02e-07 | 315 |
presumptive mesoderm | 1.02e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.65e-15 | 31 |
leukemia | 5.32e-11 | 39 |
hematologic cancer | 2.68e-07 | 51 |
immune system cancer | 2.68e-07 | 51 |