FFCP PHASE1:Hg19::chr20:45035223..45035280,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:45035223..45035280,-
|short_description=p1@ELMO2
|description=CAGE_peak_1_at_ELMO2_5end
|association_with_transcript=0bp_to_ENST00000290246,ENST0000039639...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63916 | |EntrezGene=63916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17233 | |HGNC=17233 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JJ3,B4DRL5,Q5JVZ4,Q7Z5G9 | |UniProt=Q96JJ3,B4DRL5,Q5JVZ4,Q7Z5G9 | ||
|association_with_transcript=0bp_to_ENST00000290246,ENST00000396391,ENST00000439931,ENST00000450812,ENST00000460474,ENST00000469801,ENST00000488853,ENST00000497412,NM_133171,NM_182764,uc002xrt.1,uc002xru.1,uc002xrx.1,uc010zxr.1_5end | |||
|cluster_id=chr20:45035223..45035280,- | |||
|description=CAGE_peak_1_at_ELMO2_5end | |||
|id=chr20:45035223..45035280,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.74e-22!115;UBERON:0001049!7.66e-22!57;UBERON:0005068!7.66e-22!57;UBERON:0006241!7.66e-22!57;UBERON:0007135!7.66e-22!57;UBERON:0002616!1.49e-20!59;UBERON:0000955!1.04e-18!69;UBERON:0006238!1.04e-18!69;UBERON:0001017!9.15e-18!82;UBERON:0003080!2.52e-17!42;UBERON:0002780!5.32e-17!41;UBERON:0001890!5.32e-17!41;UBERON:0006240!5.32e-17!41;UBERON:0005743!1.50e-16!86;UBERON:0000073!3.80e-15!94;UBERON:0001016!3.80e-15!94;UBERON:0001893!8.75e-15!34;UBERON:0002020!2.10e-14!34;UBERON:0003528!2.10e-14!34;UBERON:0003075!3.50e-14!86;UBERON:0007284!3.50e-14!86;UBERON:0002791!3.69e-14!33;UBERON:0001869!1.53e-13!32;UBERON:0002346!9.02e-13!90;UBERON:0002619!4.87e-12!22;UBERON:0000153!9.83e-12!129;UBERON:0007811!9.83e-12!129;UBERON:0001950!6.67e-11!20;UBERON:0000033!1.35e-10!123;UBERON:0000956!2.12e-10!25;UBERON:0000203!2.12e-10!25;UBERON:0003056!2.71e-10!61;UBERON:0004121!1.37e-09!169;UBERON:0000924!6.97e-09!173;UBERON:0006601!6.97e-09!173;UBERON:0000475!1.13e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.63e-13;41!UBERON:0001890;7.63e-13;41!UBERON:0001893;1.28e-12;34!UBERON:0003528;2.02e-12;34!UBERON:0002020;2.02e-12;34!UBERON:0000073;2.12e-12;53!UBERON:0002616;2.12e-12;53!UBERON:0002791;3.12e-12;32!UBERON:0001869;3.22e-12;32!UBERON:0002619;3.27e-12;22!UBERON:0001950;4.60e-11;20!UBERON:0000956;1.33e-10;25!UBERON:0000203;1.33e-10;25!UBERON:0000955;5.12e-09;68!UBERON:0001017;2.88e-08;75!UBERON:0001016;4.18e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.24e-21,114;UBERON:0001049,1.66e-21,56;UBERON:0005068,1.66e-21,56;UBERON:0006241,1.66e-21,56;UBERON:0007135,1.66e-21,56;UBERON:0000073,2.16e-20,53;UBERON:0002616,2.16e-20,53;UBERON:0000955,2.24e-18,68;UBERON:0006238,2.24e-18,68;UBERON:0001017,1.94e-17,81;UBERON:0002780,5.32e-17,41;UBERON:0001890,5.32e-17,41;UBERON:0003080,5.32e-17,41;UBERON:0006240,5.32e-17,41;UBERON:0001016,7.14e-16,89;UBERON:0003075,3.17e-15,82;UBERON:0007284,3.17e-15,82;UBERON:0001893,8.75e-15,34;UBERON:0003528,2.10e-14,34;UBERON:0002020,2.10e-14,34;UBERON:0002346,1.09e-13,86;UBERON:0001869,1.53e-13,32;UBERON:0002791,1.63e-13,32;UBERON:0010314,5.81e-13,132;UBERON:0010371,2.06e-12,104;UBERON:0002619,4.87e-12,22;UBERON:0001950,6.67e-11,20;UBERON:0003056,1.75e-10,61;UBERON:0000956,2.12e-10,25;UBERON:0000203,2.12e-10,25;UBERON:0004121,1.45e-09,171;UBERON:0000924,1.45e-09,171;UBERON:0006601,1.45e-09,171 | |||
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1228584 | ||
|short_description=p1@ELMO2 | |||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p1@ELMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELMO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000290246, ENST00000396391, ENST00000439931, ENST00000450812, ENST00000460474, ENST00000469801, ENST00000488853, ENST00000497412, NM_133171, NM_182764, uc002xrt.1, uc002xru.1, uc002xrx.1, uc010zxr.1_5end |
EntrezGene: | ELMO2 |
HGNC: | 17233 |
UniProt: | Q96JJ3B4DRL5Q5JVZ4Q7Z5G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.24e-21 | 114 |
neural tube | 1.66e-21 | 56 |
neural rod | 1.66e-21 | 56 |
future spinal cord | 1.66e-21 | 56 |
neural keel | 1.66e-21 | 56 |
regional part of nervous system | 2.16e-20 | 53 |
regional part of brain | 2.16e-20 | 53 |
brain | 2.24e-18 | 68 |
future brain | 2.24e-18 | 68 |
central nervous system | 1.94e-17 | 81 |
regional part of forebrain | 5.32e-17 | 41 |
forebrain | 5.32e-17 | 41 |
anterior neural tube | 5.32e-17 | 41 |
future forebrain | 5.32e-17 | 41 |
nervous system | 7.14e-16 | 89 |
neural plate | 3.17e-15 | 82 |
presumptive neural plate | 3.17e-15 | 82 |
telencephalon | 8.75e-15 | 34 |
brain grey matter | 2.10e-14 | 34 |
gray matter | 2.10e-14 | 34 |
neurectoderm | 1.09e-13 | 86 |
cerebral hemisphere | 1.53e-13 | 32 |
regional part of telencephalon | 1.63e-13 | 32 |
structure with developmental contribution from neural crest | 5.81e-13 | 132 |
ecto-epithelium | 2.06e-12 | 104 |
regional part of cerebral cortex | 4.87e-12 | 22 |
neocortex | 6.67e-11 | 20 |
pre-chordal neural plate | 1.75e-10 | 61 |
cerebral cortex | 2.12e-10 | 25 |
pallium | 2.12e-10 | 25 |
ectoderm-derived structure | 1.45e-09 | 171 |
ectoderm | 1.45e-09 | 171 |
presumptive ectoderm | 1.45e-09 | 171 |