FFCP PHASE1:Hg19::chr10:64028377..64028388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=219790 | |EntrezGene=219790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19364 | |HGNC=19364 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZC4 | |UniProt=Q8IZC4 | ||
|association_with_transcript=77bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end | |association_with_transcript=77bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end | ||
|cluster_id=chr10:64028377..64028388,- | |||
|coexpression_cluster_id=C3033 | |coexpression_cluster_id=C3033 | ||
|description=CAGE_peak_5_at_RTKN2_5end | |description=CAGE_peak_5_at_RTKN2_5end | ||
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|ontology_enrichment_celltype=CL:0000133!3.96e-10!59;CL:0000221!3.07e-07!71 | |ontology_enrichment_celltype=CL:0000133!3.96e-10!59;CL:0000221!3.07e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.43e-14;5!CL:0002321;4.42e-14;15!CL:0002605;4.46e-10;3!CL:0000333;9.56e-10;5!CL:0000128;1.91e-07;7!CL:0000126;1.91e-07;7!CL:0000127;1.91e-07;7!CL:0002319;1.95e-07;25 | |ontology_enrichment_celltype_v019=CL:0002322;3.43e-14;5!CL:0002321;4.42e-14;15!CL:0002605;4.46e-10;3!CL:0000333;9.56e-10;5!CL:0000128;1.91e-07;7!CL:0000126;1.91e-07;7!CL:0000127;1.91e-07;7!CL:0002319;1.95e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.24e-15,5;CL:0000133,1.08e-12,59;CL:0000333,4.73e-12,41;CL:0002605,2.83e-10,3;CL:0000221,1.21e-09,72;CL:0002319,1.33e-07,25;CL:0000128,1.42e-07,7;CL:0000126,1.42e-07,7;CL:0000127,1.42e-07,7;CL:0002453,1.42e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000133;3.88e-08;59 | |ontology_enrichment_development_v019=CL:0000133;3.88e-08;59 | ||
|ontology_enrichment_disease=DOID:162!1.71e-21!235;DOID:14566!3.83e-20!239;DOID:0050687!1.89e-15!143;DOID:305!4.56e-15!106;DOID:0050686!2.02e-08!137;DOID:3119!4.10e-08!14 | |ontology_enrichment_disease=DOID:162!1.71e-21!235;DOID:14566!3.83e-20!239;DOID:0050687!1.89e-15!143;DOID:305!4.56e-15!106;DOID:0050686!2.02e-08!137;DOID:3119!4.10e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:169;4.04e-08;6 | |ontology_enrichment_disease_v019=DOID:169;4.04e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,6.25e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.56e-10;5!UBERON:0002410;9.56e-10;5 | |ontology_enrichment_uberon_v019=UBERON:0000013;9.56e-10;5!UBERON:0002410;9.56e-10;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.63e-09,5;UBERON:0002410,1.63e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,3.14859585844162,1.64249310087461,2.13422487311165,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,1.03988298880475,0.665188192387692,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.264818361626438,1.43418310374407,1.06400514659507,0,0,0.24666754841716,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0,0,0,0.302256294682921,0,0.193260853163297,0,0,1.70763188581434,1.98794652482228,1.62671520017326,1.34759371519982,1.7662459561294,1.45990943630332,0,0,0,0,0,0.236613600079688,1.18009283054671,0,0.330881918197182,0.435758888184812,0,0.134831308160164,0.784885860501384,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0.176096868026452,0,0,0,0.888970520090367,0,0,0,0.616964956219941,1.20137223137567,0.285826432630578,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,1.32969058292435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0.254094624222463,0,2.31986643833309,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.473107245101804,0.468565659970853,0,0,0,1.32845119707087,0.553107505625109,0.781952530212746,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.887808626565635,0.492762936082855,0,0.348631135379878,1.45031339509947,0,0,0.68888668898764,2.00300284807389,0.655622074797121,0,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0,1.46511143709349,0.907604499126468,0,0,0,0,0,0,0,0.322260734604821,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,1.2655176988749,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,1.22849920267187,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,1.06428319221179,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,2.88743956579008,1.71528151186722,0.557409525377156,1.00988449083511,3.84165954081436,0.956557636372934,0,0,0.635020748171649,0.324621940274555,0.842391534340376,0,0,0,0,0,0,0,1.03051603426729,0,0,0.333698283423817,0,0.278406173895242,1.23087398947712,1.35227839237992,1.6653598399891,0,0.18714054040822,0,0.121360521749513,0.445773537109913,0.284136146806413,0,0.593929361665277,0,0,0,0.111308705022906,0,1.26675244876796,0,0,0.503865495708552,3.88620993508188,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,1.38899995946634,0,0,0,0,0,0,0.21787692703798,3.76444109552229,0,0.341826167541004,0,0.269272933229316,0.325942115766024,0,0.641183153813036,0,0,0.31396051279005,0,0,0,0,0,0.476809736941136,0,0.163232808159148,3.39247371441458,0.865554558968364,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0.234264445725339,0.182454789215666,0.586993856796269,0,0,0,0,0.126373159256976,1.05226393590145,0.311064574191741,0,0,0,0,0,0,0,0.979923974143776,0.174118413160805,0,0,0.0967563312890851,0.292357268344742,0.246346371159628,0.290967049465258,0,0,0.822251547880505,0,0.253243183823515,0.391102765469606,0,0,0.599428828746391,0.72045208577053,1.03082936549324,0.857974989309823,0,0,0,0.951329442515298,1.569042694685,0.815985741090574,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0,0.268733889946905,0,0,1.02418136999391,1.2362378757175,1.01105315781277,0.0984274815147488,0,0,0,1.28602518772015,1.2378549293751,0.83088067605837,0.2249738915515,0,0,0.670869375198532,0,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,1.32506888912221,0,0,0,0,0.320362237703084,0.471612915298998,0.828478110694391,0,0,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,1.52183498429854,0.124980407962107,0.758245587708239,0,0,0,0.28984205722165,0.597019211547496,0.467426619694449,0,0,0.251567901752575,0,0,0,0.15543720058278,1.18284119991707,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.363697318405119,0,0,0.398095888698616,2.40016658797892,0.343395705182793,0.336749488765919,0,0,1.50109113962448,0.521988583930423,0.906823702049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| ||
|short_description=p5@RTKN2 | |short_description=p5@RTKN2 | ||
}} | }} |
Latest revision as of 18:58, 18 September 2015
Short description: | p5@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RTKN2_5end |
Coexpression cluster: | C3033_non_colon_hepatoblastoma_astrocytoma_prostate_rhabdomyosarcoma_acute |
Association with transcript: | 77bp_to_ENST00000373789, ENST00000395260, ENST00000395265, NM_145307, uc001jlw.2, uc001jlx.2_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q8IZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.24e-15 | 5 |
neurectodermal cell | 1.08e-12 | 59 |
migratory neural crest cell | 4.73e-12 | 41 |
astrocyte of the cerebral cortex | 2.83e-10 | 3 |
ectodermal cell | 1.21e-09 | 72 |
neural cell | 1.33e-07 | 25 |
oligodendrocyte | 1.42e-07 | 7 |
macroglial cell | 1.42e-07 | 7 |
astrocyte | 1.42e-07 | 7 |
oligodendrocyte precursor cell | 1.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.63e-09 | 5 |
autonomic nervous system | 1.63e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.25e-08 | 6 |