FFCP PHASE1:Hg19::chr12:102591576..102591596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5367 | |EntrezGene=5367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9109 | |HGNC=9109 | ||
|TSSclassifier=strong | |||
|UniProt=P20382 | |UniProt=P20382 | ||
|association_with_transcript=17bp_to_NM_002674,uc001tjl.2_5end | |association_with_transcript=17bp_to_NM_002674,uc001tjl.2_5end | ||
|cluster_id=chr12:102591576..102591596,- | |||
|coexpression_cluster_id=C388 | |coexpression_cluster_id=C388 | ||
|description=CAGE_peak_1_at_PMCH_5end | |description=CAGE_peak_1_at_PMCH_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000815!9.95e-13!2;CL:0000792!9.95e-13!2;CL:0002677!9.95e-13!2;CL:0002544!4.64e-09!6;CL:0000898!9.08e-09!3 | |ontology_enrichment_celltype=CL:0000815!9.95e-13!2;CL:0000792!9.95e-13!2;CL:0002677!9.95e-13!2;CL:0002544!4.64e-09!6;CL:0000898!9.08e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000815;2.90e-12;2!CL:0000792;2.90e-12;2!CL:0002677;2.90e-12;2!CL:0000898;1.30e-08;3 | |ontology_enrichment_celltype_v019=CL:0000815;2.90e-12;2!CL:0000792;2.90e-12;2!CL:0002677;2.90e-12;2!CL:0000898;1.30e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.59e-12,2;CL:0000792,2.59e-12,2;CL:0002677,2.59e-12,2;CL:0000898,1.21e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!3.78e-07!1;DOID:0060061!3.78e-07!1;DOID:8691!3.78e-07!1;DOID:4960!8.49e-07!1;DOID:0070004!8.49e-07!1 | |ontology_enrichment_disease=DOID:0060060!3.78e-07!1;DOID:0060061!3.78e-07!1;DOID:8691!3.78e-07!1;DOID:4960!8.49e-07!1;DOID:0070004!8.49e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!5.04e-08!3;UBERON:0004854!5.04e-08!3;UBERON:0009034!5.04e-08!3;UBERON:0002095!5.04e-08!3;UBERON:0004782!5.04e-08!3;UBERON:0003281!5.04e-08!3;UBERON:0009664!5.04e-08!3;UBERON:0002296!5.04e-08!3;UBERON:0005602!5.04e-08!3;UBERON:0001179!5.04e-08!3;UBERON:0006293!5.04e-08!3;UBERON:0004177!1.74e-07!7;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0001301!8.02e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!5.04e-08!3;UBERON:0004854!5.04e-08!3;UBERON:0009034!5.04e-08!3;UBERON:0002095!5.04e-08!3;UBERON:0004782!5.04e-08!3;UBERON:0003281!5.04e-08!3;UBERON:0009664!5.04e-08!3;UBERON:0002296!5.04e-08!3;UBERON:0005602!5.04e-08!3;UBERON:0001179!5.04e-08!3;UBERON:0006293!5.04e-08!3;UBERON:0004177!1.74e-07!7;UBERON:0001154!6.02e-07!1;UBERON:0001153!6.02e-07!1;UBERON:0001301!8.02e-07!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@PMCH | |short_description=p1@PMCH | ||
}} | }} |
Latest revision as of 20:53, 15 September 2015
Short description: | p1@PMCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PMCH_5end |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | 17bp_to_NM_002674, uc001tjl.2_5end |
EntrezGene: | PMCH |
HGNC: | 9109 |
UniProt: | P20382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.59e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.59e-12 | 2 |
naive regulatory T cell | 2.59e-12 | 2 |
naive T cell | 1.21e-08 | 3 |