FFCP PHASE1:Hg19::chr20:44638633..44638646,+: Difference between revisions
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|id=chr20:44638633..44638646,+
|short_description=p@chr20:44638633..44638646,+
|description=CAGE_peak_at_chr20:44638633..44638646,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:44638633..44638646,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_at_chr20:44638633..44638646,+ | |||
|id=chr20:44638633..44638646,+ | |||
|ontology_enrichment_celltype=CL:0000235!1.58e-28!10;CL:0002194!2.42e-18!63;CL:0000576!2.42e-18!63;CL:0000040!2.42e-18!63;CL:0000559!2.42e-18!63;CL:0002009!1.02e-17!65;CL:0000839!2.65e-16!70;CL:0000557!4.82e-16!71;CL:0000766!7.55e-15!76;CL:0000763!2.29e-09!112;CL:0000049!2.29e-09!112;CL:0000244!7.01e-09!4;CL:0000731!7.01e-09!4;CL:0002087!1.10e-08!119;CL:0002031!3.04e-08!124;CL:0000738!4.81e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.72e-168;6!CL:0000473;1.89e-22;39!CL:0000234;1.89e-22;39!CL:0000766;2.02e-08;69!CL:0000244;2.61e-08;4!CL:0000731;2.61e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.73e-168,6;CL:0000473,1.80e-21,48;CL:0000234,1.80e-21,48;CL:0002194,3.02e-17,59;CL:0000576,3.02e-17,59;CL:0000040,3.02e-17,59;CL:0000559,3.02e-17,59;CL:0002009,1.06e-16,61;CL:0000839,1.77e-15,66;CL:0000557,2.96e-15,67;CL:0000766,3.14e-14,72;CL:0000763,1.33e-09,108;CL:0000049,1.33e-09,108;CL:0002087,4.92e-09,115;CL:0002031,1.15e-08,120;CL:0000244,2.61e-08,4;CL:0000731,2.61e-08,4;CL:0000738,1.14e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.34e-14!80;UBERON:0001474!7.18e-13!86;UBERON:0004765!1.25e-10!101;UBERON:0001434!1.25e-10!101;UBERON:0002390!1.67e-10!102;UBERON:0003061!1.67e-10!102;UBERON:0002193!2.29e-09!112;UBERON:0007029!3.05e-09!1;UBERON:0002405!4.59e-09!115;UBERON:0002204!1.17e-07!167;UBERON:0000365!2.88e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-13,76;UBERON:0001474,1.51e-12,82;UBERON:0004765,1.83e-11,90;UBERON:0002405,4.18e-11,93;UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98;UBERON:0001434,2.38e-10,100;UBERON:0002193,1.33e-09,108;UBERON:0000365,6.77e-07,5 | |||
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|short_description=p@chr20:44638633..44638646,+ | |||
}} | }} |
Latest revision as of 14:36, 28 July 2015
Short description: | p@chr20:44638633..44638646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44638633..44638646, + |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.73e-168 | 6 |
defensive cell | 1.80e-21 | 48 |
phagocyte | 1.80e-21 | 48 |
monopoietic cell | 3.02e-17 | 59 |
monocyte | 3.02e-17 | 59 |
monoblast | 3.02e-17 | 59 |
promonocyte | 3.02e-17 | 59 |
macrophage dendritic cell progenitor | 1.06e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-15 | 66 |
granulocyte monocyte progenitor cell | 2.96e-15 | 67 |
myeloid leukocyte | 3.14e-14 | 72 |
myeloid cell | 1.33e-09 | 108 |
common myeloid progenitor | 1.33e-09 | 108 |
nongranular leukocyte | 4.92e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
transitional epithelial cell | 2.61e-08 | 4 |
urothelial cell | 2.61e-08 | 4 |
leukocyte | 1.14e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-13 | 76 |
bone element | 1.51e-12 | 82 |
skeletal element | 1.83e-11 | 90 |
immune system | 4.18e-11 | 93 |
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |
skeletal system | 2.38e-10 | 100 |
hemolymphoid system | 1.33e-09 | 108 |
urothelium | 6.77e-07 | 5 |