FFCP PHASE1:Hg19::chr2:101436564..101436647,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4862 | |EntrezGene=4862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7895 | |HGNC=7895 | ||
|TSSclassifier=strong | |||
|UniProt=Q99743,A2I2P5 | |UniProt=Q99743,A2I2P5 | ||
|association_with_transcript=0bp_to_ENST00000335681,NM_002518,uc002tap.1_5end | |association_with_transcript=0bp_to_ENST00000335681,NM_002518,uc002tap.1_5end | ||
|cluster_id=chr2:101436564..101436647,+ | |||
|description=CAGE_peak_1_at_NPAS2_5end | |description=CAGE_peak_1_at_NPAS2_5end | ||
|id=chr2:101436564..101436647,+ | |id=chr2:101436564..101436647,+ | ||
|ontology_enrichment_celltype=CL:0000220!6.54e-09!246;CL:0002321!1.53e-08!248;CL:0000055!3.41e-08!180;CL:0000183!1.05e-07!59;CL:0000187!1.08e-07!54;CL:0000680!2.80e-07!57;CL:0000056!2.80e-07!57;CL:0000355!2.80e-07!57;CL:0000192!3.21e-07!42;CL:0000514!3.21e-07!42;CL:0000359!3.37e-07!32;CL:0000222!9.45e-07!119 | |ontology_enrichment_celltype=CL:0000220!6.54e-09!246;CL:0002321!1.53e-08!248;CL:0000055!3.41e-08!180;CL:0000183!1.05e-07!59;CL:0000187!1.08e-07!54;CL:0000680!2.80e-07!57;CL:0000056!2.80e-07!57;CL:0000355!2.80e-07!57;CL:0000192!3.21e-07!42;CL:0000514!3.21e-07!42;CL:0000359!3.37e-07!32;CL:0000222!9.45e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.18e-07;32 | |ontology_enrichment_celltype_v019=CL:0000359;6.18e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.41e-08,250;CL:0000187,7.53e-08,55;CL:0000680,1.96e-07,58;CL:0000056,1.96e-07,58;CL:0000355,1.96e-07,58;CL:0000192,2.27e-07,43;CL:0000514,2.27e-07,43;CL:0000359,3.12e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.60e-07!14 | |ontology_enrichment_disease=DOID:2394!6.60e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.21e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;6.21e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004111!4.76e-32!241;UBERON:0000483!1.97e-29!309;UBERON:0000119!3.42e-29!312;UBERON:0000025!1.04e-28!194;UBERON:0000477!1.17e-28!286;UBERON:0000481!3.30e-28!347;UBERON:0000475!1.23e-24!365;UBERON:0000467!1.72e-21!625;UBERON:0000480!4.37e-21!626;UBERON:0000468!9.29e-21!659;UBERON:0003914!3.65e-19!118;UBERON:0002050!5.94e-19!605;UBERON:0005423!5.94e-19!605;UBERON:0000923!9.59e-19!604;UBERON:0005291!9.59e-19!604;UBERON:0006598!9.59e-19!604;UBERON:0002532!9.59e-19!604;UBERON:0004872!3.58e-18!84;UBERON:0000922!6.87e-18!612;UBERON:0003104!3.34e-14!238;UBERON:0009142!3.34e-14!238;UBERON:0002100!5.97e-14!216;UBERON:0001981!2.41e-13!60;UBERON:0007500!2.41e-13!60;UBERON:0004537!2.41e-13!60;UBERON:0006965!2.41e-13!60;UBERON:0000490!2.42e-13!138;UBERON:0000055!3.54e-13!69;UBERON:0002049!3.44e-12!79;UBERON:0007798!3.44e-12!79;UBERON:0005256!5.87e-12!143;UBERON:0001009!1.51e-11!113;UBERON:0007023!6.87e-11!115;UBERON:0001637!1.16e-10!42;UBERON:0003509!1.16e-10!42;UBERON:0004572!1.16e-10!42;UBERON:0004535!1.70e-10!110;UBERON:0001048!2.03e-10!168;UBERON:0003080!5.67e-10!42;UBERON:0004119!7.02e-10!169;UBERON:0000925!7.02e-10!169;UBERON:0006595!7.02e-10!169;UBERON:0001049!7.10e-10!57;UBERON:0005068!7.10e-10!57;UBERON:0006241!7.10e-10!57;UBERON:0007135!7.10e-10!57;UBERON:0002780!7.82e-10!41;UBERON:0001890!7.82e-10!41;UBERON:0006240!7.82e-10!41;UBERON:0000062!1.04e-09!511;UBERON:0000466!1.42e-09!126;UBERON:0004573!2.25e-09!33;UBERON:0004571!2.25e-09!33;UBERON:0002616!3.35e-09!59;UBERON:0004121!3.58e-09!169;UBERON:0000077!6.47e-09!130;UBERON:0007100!9.38e-09!27;UBERON:0001869!1.21e-08!32;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0000064!2.35e-08!219;UBERON:0000924!2.47e-08!173;UBERON:0006601!2.47e-08!173;UBERON:0001007!2.70e-08!155;UBERON:0001555!2.70e-08!155;UBERON:0007026!2.70e-08!155;UBERON:0001893!2.76e-08!34;UBERON:0004290!3.60e-08!70;UBERON:0000914!3.72e-08!83;UBERON:0002329!3.72e-08!83;UBERON:0003077!3.72e-08!83;UBERON:0003059!3.72e-08!83;UBERON:0007282!3.72e-08!83;UBERON:0009618!3.72e-08!83;UBERON:0007285!3.72e-08!83;UBERON:0004921!3.86e-08!129;UBERON:0004185!3.86e-08!129;UBERON:0002385!4.71e-08!63;UBERON:0001015!4.71e-08!63;UBERON:0000383!4.71e-08!63;UBERON:0000955!5.46e-08!69;UBERON:0006238!5.46e-08!69;UBERON:0002791!5.61e-08!33;UBERON:0003075!5.86e-08!86;UBERON:0007284!5.86e-08!86;UBERON:0000033!9.16e-08!123;UBERON:0000486!1.20e-07!82;UBERON:0003056!1.42e-07!61;UBERON:0002619!1.84e-07!22;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0001134!2.30e-07!61;UBERON:0002036!2.30e-07!61;UBERON:0003082!2.30e-07!61;UBERON:0001950!6.59e-07!20;UBERON:0002346!7.17e-07!90;UBERON:0000153!9.27e-07!129;UBERON:0007811!9.27e-07!129;UBERON:0000947!9.38e-07!21;UBERON:0010191!9.38e-07!21 | |ontology_enrichment_uberon=UBERON:0004111!4.76e-32!241;UBERON:0000483!1.97e-29!309;UBERON:0000119!3.42e-29!312;UBERON:0000025!1.04e-28!194;UBERON:0000477!1.17e-28!286;UBERON:0000481!3.30e-28!347;UBERON:0000475!1.23e-24!365;UBERON:0000467!1.72e-21!625;UBERON:0000480!4.37e-21!626;UBERON:0000468!9.29e-21!659;UBERON:0003914!3.65e-19!118;UBERON:0002050!5.94e-19!605;UBERON:0005423!5.94e-19!605;UBERON:0000923!9.59e-19!604;UBERON:0005291!9.59e-19!604;UBERON:0006598!9.59e-19!604;UBERON:0002532!9.59e-19!604;UBERON:0004872!3.58e-18!84;UBERON:0000922!6.87e-18!612;UBERON:0003104!3.34e-14!238;UBERON:0009142!3.34e-14!238;UBERON:0002100!5.97e-14!216;UBERON:0001981!2.41e-13!60;UBERON:0007500!2.41e-13!60;UBERON:0004537!2.41e-13!60;UBERON:0006965!2.41e-13!60;UBERON:0000490!2.42e-13!138;UBERON:0000055!3.54e-13!69;UBERON:0002049!3.44e-12!79;UBERON:0007798!3.44e-12!79;UBERON:0005256!5.87e-12!143;UBERON:0001009!1.51e-11!113;UBERON:0007023!6.87e-11!115;UBERON:0001637!1.16e-10!42;UBERON:0003509!1.16e-10!42;UBERON:0004572!1.16e-10!42;UBERON:0004535!1.70e-10!110;UBERON:0001048!2.03e-10!168;UBERON:0003080!5.67e-10!42;UBERON:0004119!7.02e-10!169;UBERON:0000925!7.02e-10!169;UBERON:0006595!7.02e-10!169;UBERON:0001049!7.10e-10!57;UBERON:0005068!7.10e-10!57;UBERON:0006241!7.10e-10!57;UBERON:0007135!7.10e-10!57;UBERON:0002780!7.82e-10!41;UBERON:0001890!7.82e-10!41;UBERON:0006240!7.82e-10!41;UBERON:0000062!1.04e-09!511;UBERON:0000466!1.42e-09!126;UBERON:0004573!2.25e-09!33;UBERON:0004571!2.25e-09!33;UBERON:0002616!3.35e-09!59;UBERON:0004121!3.58e-09!169;UBERON:0000077!6.47e-09!130;UBERON:0007100!9.38e-09!27;UBERON:0001869!1.21e-08!32;UBERON:0002020!1.36e-08!34;UBERON:0003528!1.36e-08!34;UBERON:0000064!2.35e-08!219;UBERON:0000924!2.47e-08!173;UBERON:0006601!2.47e-08!173;UBERON:0001007!2.70e-08!155;UBERON:0001555!2.70e-08!155;UBERON:0007026!2.70e-08!155;UBERON:0001893!2.76e-08!34;UBERON:0004290!3.60e-08!70;UBERON:0000914!3.72e-08!83;UBERON:0002329!3.72e-08!83;UBERON:0003077!3.72e-08!83;UBERON:0003059!3.72e-08!83;UBERON:0007282!3.72e-08!83;UBERON:0009618!3.72e-08!83;UBERON:0007285!3.72e-08!83;UBERON:0004921!3.86e-08!129;UBERON:0004185!3.86e-08!129;UBERON:0002385!4.71e-08!63;UBERON:0001015!4.71e-08!63;UBERON:0000383!4.71e-08!63;UBERON:0000955!5.46e-08!69;UBERON:0006238!5.46e-08!69;UBERON:0002791!5.61e-08!33;UBERON:0003075!5.86e-08!86;UBERON:0007284!5.86e-08!86;UBERON:0000033!9.16e-08!123;UBERON:0000486!1.20e-07!82;UBERON:0003056!1.42e-07!61;UBERON:0002619!1.84e-07!22;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0001134!2.30e-07!61;UBERON:0002036!2.30e-07!61;UBERON:0003082!2.30e-07!61;UBERON:0001950!6.59e-07!20;UBERON:0002346!7.17e-07!90;UBERON:0000153!9.27e-07!129;UBERON:0007811!9.27e-07!129;UBERON:0000947!9.38e-07!21;UBERON:0010191!9.38e-07!21 | ||
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| ||
|short_description=p1@NPAS2 | |short_description=p1@NPAS2 | ||
}} | }} |
Latest revision as of 23:22, 15 September 2015
Short description: | p1@NPAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335681, NM_002518, uc002tap.1_5end |
EntrezGene: | NPAS2 |
HGNC: | 7895 |
UniProt: | Q99743A2I2P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.41e-08 | 250 |
muscle cell | 7.53e-08 | 55 |
muscle precursor cell | 1.96e-07 | 58 |
myoblast | 1.96e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-07 | 58 |
smooth muscle cell | 2.27e-07 | 43 |
smooth muscle myoblast | 2.27e-07 | 43 |
vascular associated smooth muscle cell | 3.12e-07 | 32 |
Ontology term | p-value | n |
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